yeast8.txt
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UniProt - Swiss-Prot Protein Knowledgebase
Swiss Institute of Bioinformatics (SIB); Geneva, Switzerland
European Bioinformatics Institute (EBI); Hinxton, United Kingdom
Protein Information Resource (PIR); Washington DC, USA
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Description: Yeast (Saccharomyces cerevisiae) chromosome 8 (VIII): entries
and gene names
Name: yeast8.txt
Release: 56.2 of 23-Sep-2008
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=========================================
Yeast chromosome VIII open reading frames
=========================================
Reference for complete sequence:
RX [Pubmed: 8091229]
RA Johnston M., Andrews S., Brinkman R., Cooper J., Ding H., Dover J.,
RA Du Z., Favello A., Fulton L., Gattung S., Geisel C., Kirsten J.,
RA Kucaba T., Hillier L.W., Jier M., Johnston L., Langston Y.,
RA Latreille P., Louis E.J., Macri C., Mardis E., Menezes S., Mouser L.,
RA Nhan M., Rifkin L., Riles L., St Peter H., Trevaskis E., Vaughan K.,
RA Vignati D., Wilcox L., Wohldman P., Waterston R., Wilson R.,
RA Vaudin M.;
RT "Complete nucleotide sequence of Saccharomyces cerevisiae chromosome
RT VIII.";
RL Science 265:2077-2082(1994).
Size of CHRVIII: 589 Kb
Total number of ORFs currently in Swiss-Prot: 306
=====================
ORF code nomenclature
=====================
YX[L|R]ddd[w|c]
Y = Yeast
X = Letter representing the chromosome (in this case X is 'H' for CHRVIII)
L | R = 'L' is for Left arm; 'R' is for Right arm
ddd = ORF number on the left or right arm
c | w = 'c' is for complementary strand; 'w' is for Watson strand
==================
Categories of ORFs
==================
1: genetically and biochemically characterized
2: genetically characterized, but exact function not known
3: high similarity to a protein of characterized function
4: high similarity to a protein of uncharacterized function
5: low similarity to an existing protein
6: no known similarity (temporary assignment)
7: probable non-expressed ORF
__________ __________ ______ ____ ___________________ ________________ ____
ORF Swiss-Prot Size Gene name and ORF code Cat.
code entry name AC a.a. synonyms synonyms
__________ __________ ______ ____ ___________________ ________________ ____
YHL050C YHF0_YEAST P38721 697 4
YHL050W-A YH050_YEAST P0C5B8 160 4
YHL049C YHE9_YEAST P38722 271 6
YHL048W COS8_YEAST P38723 381 COS8 2
YHL048C-A YH048_YEAST Q3E758 44 6
YHL047c ARN2_YEAST P38724 637 ARN2; TAF1 1
YHL046C PAU13_YEAST P38725 120 PAU13 2
YHL045W YHE5_YEAST P38726 115 4
YHL044W YHE4_YEAST P38727 235 4
YHL043W ECM34_YEAST P38728 170 ECM34 2
YHL042W YHE2_YEAST P38729 150 6
YHL041W YHE1_YEAST P38730 149 6
YHL040c ARN1_YEAST P38731 627 ARN1 1
YHL039W YHD9_YEAST P38732 585 6
YHL038C CBP2_YEAST P03874 630 CBP2 2
YHL037C YHD7_YEAST P38733 159 6
YHL036W MUP3_YEAST P38734 546 MUP3 1
YHL035C YHD5_YEAST P38735 1592 3
YHL034C SSBP1_YEAST P10080 294 SBP1; SSB1; SSBR1 1
YHL033C RL8A_YEAST P17076 256 RPL8A; RPL4A; MAK7 1
YHL032C GLPK_YEAST P32190 709 GUT1 1
YHL031C GOS1_YEAST P38736 223 GOS1 1
YHL030W ECM29_YEAST P38737 1868 ECM29 1
YHL029C YHC9_YEAST P38738 679 6
YHL028W WSC4_YEAST P38739 605 WSC4 1
YHL027W PACC_YEAST P33400 625 RIM101; RIM1 1
YHL026C YHC6_YEAST P38740 315 6
YHL025W SNF6_YEAST P18888 332 SNF6 2
YHL024W YHC4_YEAST P38741 713 4
YHL023C RMD11_YEAST P38742 1146 RMD11 2
YHL022C SPO11_YEAST P23179 398 SPO11 2
YHL021C YHC1_YEAST P23180 465 6
YHL020C OPI1_YEAST P21957 404 OPI1 1
YHL019C APM2_YEAST P38700 605 APM2 1
YHL018W PHS_YEAST P38744 120 3
YHL017W YHB7_YEAST P38745 532 4
YHL016C DUR3_YEAST P33413 735 DUR3 1
YHL015W RS20_YEAST P38701 121 RPS20; URP2 1
YHL015W-A YH015_YEAST Q3E7Z6 27 6
YHL014C YLF2_YEAST P38746 405 YLF2 2
YHL013C OTU2_YEAST P38747 307 OTU2 2
YHL012W UGPA2_YEAST P38709 493 3
YHL011C KPR3_YEAST P38689 320 PRS3; PRPS3 1
YHL010C YHB0_YEAST P38748 585 4
YHL009C YAP3_YEAST P38749 330 YAP3 1
YHL009W-A YH41A_YEAST Q6Q5P6 413 TY4A-H; YHL008W-B 3
YHLWTy4-1 GAG
YHL009W-B YH41B_YEAST P0C2J7 1802 TY4B-H; YHL008W-A 3
YHLWTy4-1 POL
YHL008C YHA8_YEAST P38750 627 3
YHL007C STE20_YEAST Q03497 939 STE20 1
YHL006C SHU1_YEAST P38751 150 SHU1 2
YHL005C YHA5_YEAST P38752 130 6
YHL004W RT04_YEAST P32902 394 MRP4; MRP4A 1
YHL003C LAG1_YEAST P38703 411 LAG1 1
YHL002W HSE1_YEAST P38753 452 HSE1 1
YHL001W RL14B_YEAST P38754 138 RPL14B 1
YHR001W OSH7_YEAST P38755 437 OSH7 2
YHR001W-A QCR10_YEAST P37299 77 QCR10 1
YHR002W LEU5_YEAST P38702 357 LEU5 1
YHR003C YHG3_YEAST P38756 429 4
YHR004C NEM1_YEAST P38757 446 NEM1 1
YHR005C GPA1_YEAST P08539 472 GPA1; SCG1; CDC70; 1
DAC1
YHR005C-A TIM10_YEAST P87108 93 MRS11; TIM10 1
YHR006W STP2_YEAST P38704 541 STP2 2
YHR007C CP51_YEAST P10614 530 ERG11; CYP51 1
YHR007C-A YH007_YEAST Q07074 71 6
YHR008C SODM_YEAST P00447 233 SOD2 1
YHR009C YHG9_YEAST P38758 523 4
YHR010W RL27A_YEAST P0C2H6 136 RPL27A; RPL27 1
YHR011W SYSM_YEAST P38705 446 DIA4 2
YHR012W PEP11_YEAST P38759 282 PEP11; VPS29 2
YHR013C ARD1_YEAST P07347 238 ARD1 1
YHR014W SPO13_YEAST P23624 291 SPO13 2
YHR015W YHH5_YEAST P38760 659 3
YHR016C YSC84_YEAST P32793 382 YSC84; LSB4 2
YHR017W YHH7_YEAST P32792 385 YSC83 6
YHR018C ARLY_YEAST P04076 463 ARG4 1
YHR019C SYNC_YEAST P38707 554 DED81 1
YHR020W YHI0_YEAST P38708 688 3
YHR021C RS27B_YEAST P38711 82 RPS27B 1
YHR021W-A ECM12_YEAST O13529 151 ECM12 2
YHR022C YHI2_YEAST P38763 256 5
YHR022C-A YH022_YEAST Q8TGT6 29 6
YHR023W MYO1_YEAST P08964 1928 MYO1 1
YHR024C MPPA_YEAST P11914 482 MAS2; MIF2 1
YHR025W KHSE_YEAST P17423 357 THR1 1
YHR026W VATO_YEAST P23968 213 PPA1; VMA16 1
YHR027C RPN1_YEAST P38764 993 RPN1; HRD2 1
YHR028C DAP2_YEAST P18962 818 DAP2 1
YHR029C YHI9_YEAST P38765 294 5
YHR030C SLT2_YEAST Q00772 484 SLT2; MPK1 1
YHR031C YHJ1_YEAST P38766 723 3
YHR032W YHJ2_YEAST P38767 581 4
YHR032C-A YH032_YEAST Q8TGT5 39 6
YHR032W-A YH32A_YEAST P0C5N6 59 6
YHR033W YHJ3_YEAST P38690 423 3
YHR034C PIH1_YEAST P38768 344 PIH1; NOP17 2
YHR035W YHJ5_YEAST P38769 630 5
YHR036W BRL1_YEAST P38770 471 BRL1 2
YHR037W PUT2_YEAST P07275 575 PUT2 1
YHR038W RRF1_YEAST P38771 230 RRF1; FIL1; KIM4 1
YHR039C YHJ9_YEAST P38694 644 3
YHR039C-A VATG_YEAST P48836 114 VMA10 1
YHR040W YHK0_YEAST P38772 366 5
YHR041C MED20_YEAST P34162 210 SRB2; HRS2; MED20 1
YHR042W NCPR_YEAST P16603 691 NCP1; NCPR1; PRD1 1
YHR043C DOG2_YEAST P38773 246 DOG2 1
YHR044C DOG1_YEAST P38774 246 DOG1 1
YHR045W YHK5_YEAST P38775 560 6
YHR046C INM1_YEAST P38710 295 INM1; IMP1 1
YHR047C AAP1_YEAST P37898 856 AAP1 1
YHR048W YHK8_YEAST P38776 514 5
YHR049W FSH1_YEAST P38777 243 FSH1 2
YHR049C-A YH049_YEAST O13533 103 7
YHR050W SMF2_YEAST P38778 549 SMF2 2
YHR050W-A YH50_YEAST Q05451 56 6
YHR051W COX6_YEAST P00427 148 COX6 1
YHR052W CIC1_YEAST P38779 376 CIC1; NSA3 1
YHR052W-A YH052_YEAST Q8TF97 64 6
YHR053C MTCU_YEAST P07215 61 CUP1-1; MTH1 1
YHR054C YHL4_YEAST P38780 354 4
YHR054W-A YH052_YEAST Q8TF97 64 6
YHR055C MTCU_YEAST P07215 61 CUP1-2; MTH1 1
YHR056C RSC30_YEAST P38781 883 RSC30 1
YHR057C CYPB_YEAST P23285 205 CPR2; CYP2; SCC2; 1
CRG
YHR058C MED6_YEAST P38782 295 MED6; MTR32 2
YHR059W FYV4_YEAST P38783 130 FYV4 2
YHR060W VMA22_YEAST P38784 181 VMA22 2
YHR061C GIC1_YEAST P38785 314 GIC1 1 6
YHR062C RPP1_YEAST P38786 293 RPP1 1
YHR063C PANE_YEAST P38787 379 PAN5 1
YHR064C SSZ1_YEAST P38788 538 SSZ1; PDR13 1
YHR065C RRP3_YEAST P38712 501 RRP3 1
YHR066W SSF1_YEAST P38789 453 SSF1 2
YHR067W YHM7_YEAST P38790 280 6
YHR068W DHYS_YEAST P38791 387 DYS1 1
YHR069C RRP4_YEAST P38792 359 RRP4 1
YHR070W TRM5_YEAST P38793 499 TRM5 1
YHR071W PCL5_YEAST P38794 229 PCL5 H8025.1 1
YHR072W ERG7_YEAST P38604 731 ERG7 1
YHR072W-A NOP10_YEAST Q6Q547 58 NOP10 1
YHR073W OSH3_YEAST P38713 996 OSH3 2
YHR073W-A YH73A_YEAST P0C5N7 58 6
YHR073C-B YH73B_YEAST P0C5N4 26 6
YHR074W NADE_YEAST P38795 714 QNS1 1
YHR075C PPME1_YEAST P38796 400 PPE1 2
YHR076W PP2C7_YEAST P38797 343 PTC7 1
YHR077C NMD2_YEAST P38798 1091 NMD2; UPF2; IFS1; SUA1 1
YHR078W YHN8_YEAST P38799 552 6
YHR079C IRE1_YEAST P32361 1115 IRE1; ERN1 1
YHR080C YHO0_YEAST P38800 1345 4
YHR081W LRP1_YEAST P38801 184 LRP1 1
YHR082C KSP1_YEAST P38691 1029 KSP1 1
YHR083W SAM35_YEAST P14693 329 SAM35; OMP85; TOB38; TOM38 2
YHR084W STE12_YEAST P13574 688 STE12 1
YHR085W IPI1_YEAST P38803 334 IPI1 2
YHR086W NAM8_YEAST Q00539 523 NAM8; MRE2 1
YHR086W-A YH086_YEAST Q3E746 53 6
YHR087W YHO7_YEAST P38804 111 6
YHR088W RPF1_YEAST P38805 295 RPF1 1
YHR089C GAR1_YEAST P28007 205 GAR1 1
YHR090C YNG2_YEAST P38806 282 YNG2; EAF4; NBN1 2
YHR091C SYRM_YEAST P38714 643 MSR1 1
YHR092C HXT4_YEAST P32467 576 HXT4; LGT1; RAG1 1
YHR093W AHT1_YEAST P29589 182 AHT1 2
YHR094C HXT1_YEAST P32465 570 HXT1 1
YHR095W YHP5_YEAST P38808 144 6
YHR096C HXT5_YEAST P38695 592 HXT5 1
YHR097C YHP7_YEAST P38809 366 6
YHR098C SFB3_YEAST P38810 929 SFB3; LST1 1
YHR099W TRA1_YEAST P38811 3744 TRA1 1
YHR100C YHQ0_YEAST P38812 185 6
YHR101C BIG1_YEAST P38813 335 BIG1 1
YHR102W KIC1_YEAST P38692 1080 KIC1; NRK1 1
YHR103W SBE22_YEAST P38814 852 SBE22 1
YHR104W GRE3_YEAST P38715 327 GRE3 2
YHR105W YPT35_YEAST P38815 214 YPT35 2
YHR106W TRXB2_YEAST P38816 342 TRR2 1
YHR107C CDC12_YEAST P32468 407 CDC12; CLA10; PSL7 1
YHR108W GGA2_YEAST P38817 585 GGA2 1
YHR109W CTM1_YEAST P38818 585 1
YHR110W ERP5_YEAST P38819 212 ERP5 2
YHR111W UBA4_YEAST P38820 440 UBA4; NCS3 1
YHR112C YHR2_YEAST P38716 378 3
YHR113W DNPEP_YEAST P38821 490 3
YHR114W BZZ1_YEAST P38822 633 BZZ1 2
YHR115C YHR5_YEAST P38823 416 4
YHR116W COX23_YEAST P38824 151 COX23 1
YHR117W YHR7_YEAST P38825 639 3
YHR118C ORC6_YEAST P38826 435 ORC6; AAP1 1
YHR119W SET1_YEAST P38827 1080 SET1; YTX1 1
YHR120W MSH1_YEAST P25846 959 MSH1 1
YHR121W LSM12_YEAST P38828 187 LSM12 2
YHR122W YHS2_YEAST P38829 231 6
YHR123W EPT1_YEAST P22140 391 EPT1 1
YHR124W NDT80_YEAST P38830 627 NDT80; DAS1 1
YHR125W YHS5_YEAST P38831 101 6
YHR126C YHS6_YEAST P38832 159 4
YHR127W YHS7_YEAST P38833 243 6
YHR128W UPP_YEAST P18562 216 FUR1 1
YHR129C ARP1_YEAST P38696 384 ARP1; ACT5; ACT3 2
YHR130C YHT0_YEAST P38834 111 6
YHR131C YHT1_YEAST P38835 850 4
YHR132C ECM14_YEAST P38836 430 ECM14 2
YHR132W-A IGO2_YEAST Q9P305 131 IGO2 6
YHR133C NSG1_YEAST P38837 291 NSG1 2
YHR134W YHT4_YEAST P38838 269 6
YHR135C KC11_YEAST P23291 538 YCK1; CKI2 1
YHR136C SPL2_YEAST P38839 148 SPL2 2
YHR137W ARO9_YEAST P38840 513 ARO9 1
YHR137C-A YH137_YEAST Q8TGN6 216 6
YHR138C YHT8_YEAST P38841 114 3
YHR139C SS100_YEAST P13130 326 SPS100 2
YHR139C-A YH139_YEAST O13536 103 7
YHR140W YHU0_YEAST P38842 239 6
YHR141C RL44_YEAST P02405 106 RPL44B; SCL41B; MAK18 1
YHR142W CHS7_YEAST P38843 316 CHS7 1
YHR143W DSE2_YEAST P38844 325 DSE2 2
YHR143W-A RPAB4_YEAST P40422 70 RPC10; RPB12 1
YHR144C DCTD_YEAST P06773 312 DCD1 1
YHR145C YH145_YEAST O13537 118 7
YHR146W YHU6_YEAST P38845 465 4
YHR147C RM06_YEAST P32904 214 MRPL6 1
YHR148W IMP3_YEAST P32899 183 IMP3 1
YHR149C YHU9_YEAST P32900 734 4
YHR150W PEX28_YEAST P38848 579 PEX28 2
YHR151C YHV1_YEAST P38849 526 6
YHR152W SPO12_YEAST P17123 173 SPO12 2
YHR153C SPO16_YEAST P17122 198 SPO16 2
YHR154W RT107_YEAST P38850 1070 RTT107; ESC4 1
YHR155W YHV5_YEAST P38851 1228 4
YHR156C LIN1_YEAST P38852 340 LIN1 2
YHR157W RE104_YEAST P33323 182 REC104 2
YHR158C KEL1_YEAST P38853 1164 KEL1 2
YHR159W YHV9_YEAST P38854 504 6
YHR160C PEX18_YEAST P38855 283 PEX18 2
YHR161C AP18A_YEAST P38856 637 YAP1801 1
YHR162W YHW2_YEAST P38857 129 4
YHR163W SOL3_YEAST P38858 280 SOL3 2
YHR164C DNA2_YEAST P38859 1522 DNA2 1
YHR165C PRP8_YEAST P33334 2413 PRP8; RNA8; DBF3; SLT21; USA2 1
YHR166C CDC23_YEAST P16522 626 CDC23 1
YHR168W MTG2_YEAST P38860 518 MTG2 2
YHR169W DBP8_YEAST P38719 431 DBP8 2
YHR170W NMD3_YEAST P38861 518 NDM3 2
YHR171W ATG7_YEAST P38862 630 ATG7; APG7; CVT2 1
YHR172W SPC97_YEAST P38863 823 SPC97 2
YHR173C YHX3_YEAST P38864 112 6
YHR174W ENO2_YEAST P00925 437 ENO2; ENOB 1
YHR175W CTR2_YEAST P38865 189 CTR2 1
YHR175W-A YH175_YEAST Q3E815 49 6
YHR176W FMO1_YEAST P38866 432 FMO1 1
YHR177W YHX7_YEAST P38867 453 4
YHR178W STB5_YEAST P38699 743 STB5 2
YHR179W OYE2_YEAST Q03558 400 OYE2 1
YHR180W YHY0_YEAST P38868 163 6
YHR180W-A YH80A_YEAST P0C5N8 60 smORF288 6
YHR180C-B YH180_YEAST P0C5N5 34 smORF286 6
YHR181W SVP26_YEAST P38869 228 SVP26 2
YHR182W YHY2_YEAST P38870 785 6
YHR183W 6PGD1_YEAST P38720 489 GND1 1
YHR184W SSP1_YEAST P38871 571 SSP1 2
YHR185C ADY1_YEAST P38872 237 PFS1; ADY1 2
YHR186C KOG1_YEAST P38873 1557 KOG1; LAS24 H9998.14 1
YHR187W ELP5_YEAST P38874 309 IKI1; ELP5; HAP2; TOT5 1
YHR188C GPI16_YEAST P38875 610 GPI16 1
YHR189W PTH_YEAST P38876 190 PTH1 1
YHR190W FDFT_YEAST P29704 444 ERG9 1
YHR191C CTF8_YEAST P38877 133 CTF8 2
YHR192W YHZ2_YEAST P38878 278 6
YHR193C NACA_YEAST P38879 174 EGD2 2
YHR194W MDM31_YEAST P38880 579 MDM31 2
YHR195W NVJ1_YEAST P38881 321 NVJ1; VAB36 1
YHR196W UTP9_YEAST P38882 575 UTP9 1
YHR197W RIX1_YEAST P38883 763 RIX1; IPI2 2
YHR198C YHZ8_YEAST P38884 321 4
YHR199C YHZ9_YEAST P38885 310 4
YHR199C-A YH199_YEAST Q3E7Y6 73 6
YHR200W RPN10_YEAST P38886 268 RPN10; SUN1; MCB1 1
YHR201C PPX1_YEAST P38698 397 PPX1 1
YHR202W YH02_YEAST P38887 602 6
YHR203C RS4_YEAST P05753 261 RPS4B; RPS7A 1
YHR204W YH04_YEAST P38888 796 5
YHR205W SCH9_YEAST P11792 824 SCH9; KOM1 1
YHR206W SKN7_YEAST P38889 622 SKN7; POS9; BRY1 1
YHR207C SET5_YEAST P38890 526 SET5 3
YHR208W BCA1_YEAST P38891 393 BAT1; TWT1; ECA39 1
YHR209W YH09_YEAST P38892 291 4
YHR210C YH10_YEAST P38893 341 3
YHR211W FLO5_YEAST P38894 1075 FLO5 2
YHR212C YAN0_YEAST P38895 111 4
YHR212W-A YAN1_YEAST P39561 67 6
YHR213W YAN2_YEAST P38896 198 4
YHR213W-A YH213_YEAST Q8TGT4 77 6
YHR213W-B YH21B_YEAST Q8TGK1 99 6
YHR214W YH14_YEAST P38897 203 6
YHR214W-A YH1A_YEAST O13534 161 4
YHR214C-B YH11B_YEAST O13535 1793 TY1B-H; YHRCTy1-1 POL 3
YHR214C-C YH11A_YEAST P0C2I4 478 TY1A-H; YHR214C-A 3
YHRCTy1-1 GAG
YHR214C-D YAN9_YEAST P39565 97 6
YHR214C-E YH1E_YEAST Q8TGK0 99 6
YHR215W PPAC_YEAST P38693 467 PHO12 1
YHR216W IMDH2_YEAST P38697 523 IMD2; PUR5 1
YHR217C YH17_YEAST P38898 153 4
YHR218W YH18_YEAST P38899 603 6
YHR219W YH19_YEAST P38900 624 4
YHR219C-A YH219_YEAST Q8TF93 160 4
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