SubmitCancel

Skip Header

A5F7M6

- A5F7M6_VIBC3

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here

Protein
Submitted name: Response regulator VieA
Gene
vieA, VC0395_A1258, VC395_1769

Gene:

vieA, VC0395_A1258, VC395_1769
Organism
Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
Status
Unreviewed - - Protein predictedi

UniProt

A5F7M6 - A5F7M6_VIBC3

Protein:

Submitted name: Response regulator VieA
Protein Existence: Protein predicted

Functioni

GO - Molecular functioni

  1. DNA bindingInferred from electronic annotationi Source: UniProtKB-KW
  2. phosphorelay response regulator activityInferred from electronic annotationi Source: InterPro
  3. sequence-specific DNA binding transcription factor activityInferred from electronic annotationi Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA bindingInferred from electronic annotationi Source: UniProtKB-KW
  2. phosphorelay response regulator activityInferred from electronic annotationi Source: InterPro
  3. sequence-specific DNA binding transcription factor activityInferred from electronic annotationi Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotations

Keywords - Ligandi

DNA-bindingSAAS annotations

Names & Taxonomyi

Protein namesi
Submitted name:
Response regulator VieAImported
Gene namesi
Name:vieAImported
Ordered Locus Names:VC0395_A1258, VC395_1769
OrganismiVibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
Taxonomic identifieri345073 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000000249: Chromosome 2, UP000001630: Chromosome I

PTM / Processingi

Keywords - PTMi

PhosphoproteinSAAS annotations

Interactioni

Protein-protein interaction databases

IntActiA5F7M6. 1 interaction.
STRINGi345073.VC0395_A1258.

Structurei

3D structure databases

ProteinModelPortaliA5F7M6.

Family & Domainsi

Sequence similaritiesi

Contains HTH luxR-type DNA-binding domain.SAAS annotations
Contains response regulatory domain.

Phylogenomic databases

eggNOGiCOG2204.
HOGENOMiHOG000218159.
KOiK13246.
OMAiGEDHFLE.
ProtClustDBiCLSK794295.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.20.20.450. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00052. EAL. 1 hit.
SM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5F7M6-1 [UniParc]FASTA

« Hide

MKIMIVEDDR IQATSLKLKL RQLGLDDVIL AENGFAALEL CNKVGIDLMF    50
CDIRMPQMDG ISLLSQLSLQ APKLGVVILS AVEDTILELT HNMCSLAGFA 100
YVDRLPKPYE VEDLQRVVEG FQKQTEPETS HKPAITLTCD EIEQAFLHDH 150
IFNYYQPQFD FRSGAMVGVE ALVRYEHPTH GMLSPAVFLP LIEQCGLHEK 200
LFLTVLEKSV SALASIGADL QLSVNISQRN LQHSICDPIL AICERYGFPA 250
SKLTLEMTEH EVYNRTPTSL ANLARLRMYG VGLSIDDFGT GYASLGQLAQ 300
LPFTELKIDR SFVHDLATNY KHQQLTNMCL LLAQSLGLHC VVEGVENEET 350
WQYLRQLGVD TCQGYYAAKP MPIAQLSELY TKNRRQCLGC QSMDDGWQIL 400
LVDNHMLSAT ALQKVLNKEE NVSKVFVAQD IEQTLHKLRD LPINLLVVES 450
RFLSTISPAA FHELLEPYYR GALLVLHDGL TAEAQEDEPK AIVVKANTLM 500
ETSSRILLQA QQSNVRPQAQ QEELAQLSER ELTVAKMLVE GLTNKEIALQ 550
LDINQKTVST YKTRIMTKLG IKSAMELVRF VTLK 584
Length:584
Mass (Da):65,564
Last modified:June 12, 2007 - v1
Checksum:i7E31E5AEBDA85443
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000627 Genomic DNA. Translation: ABQ21552.1.
CP001235 Genomic DNA. Translation: ACP09769.1.
RefSeqiYP_001217202.1. NC_009457.1.
YP_002820005.1. NC_012582.1.

Genome annotation databases

EnsemblBacteriaiABQ21552; ABQ21552; VC0395_A1258.
ACP09769; ACP09769; VC395_1769.
GeneIDi5137267.
7775638.
KEGGivco:VC0395_A1258.
vcr:VC395_1769.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000627 Genomic DNA. Translation: ABQ21552.1 .
CP001235 Genomic DNA. Translation: ACP09769.1 .
RefSeqi YP_001217202.1. NC_009457.1.
YP_002820005.1. NC_012582.1.

3D structure databases

ProteinModelPortali A5F7M6.
ModBasei Search...

Protein-protein interaction databases

IntActi A5F7M6. 1 interaction.
STRINGi 345073.VC0395_A1258.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABQ21552 ; ABQ21552 ; VC0395_A1258 .
ACP09769 ; ACP09769 ; VC395_1769 .
GeneIDi 5137267.
7775638.
KEGGi vco:VC0395_A1258.
vcr:VC395_1769.

Phylogenomic databases

eggNOGi COG2204.
HOGENOMi HOG000218159.
KOi K13246.
OMAi GEDHFLE.
ProtClustDBi CLSK794295.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
3.20.20.450. 1 hit.
InterProi IPR011006. CheY-like_superfamily.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00563. EAL. 1 hit.
PF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view ]
PRINTSi PR00038. HTHLUXR.
SMARTi SM00052. EAL. 1 hit.
SM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view ]
SUPFAMi SSF141868. SSF141868. 1 hit.
SSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEi PS50883. EAL. 1 hit.
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

Download
  1. Heidelberg J.
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Ogawa 395 / O395 [TIGR].
  2. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Ogawa 395 / O395 [Nankai/TEDA].

Entry nameiA5F7M6_VIBC3
AccessioniPrimary (citable) accession number: A5F7M6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: February 19, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

Similar proteinsi