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A5F7M6

- A5F7M6_VIBC3

UniProt

A5F7M6 - A5F7M6_VIBC3

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Protein
Submitted name: Response regulator VieA
Gene
vieA, VC0395_A1258, VC395_1769
Organism
Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA bindingInferred from electronic annotationi Source: UniProtKB-KW
  2. phosphorelay response regulator activityInferred from electronic annotationi Source: InterPro
  3. sequence-specific DNA binding transcription factor activityInferred from electronic annotationi Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. transcription, DNA-templatedInferred from electronic annotationi Source: UniProtKB-KW
  1. phosphorelay response regulator activityInferred from electronic annotationi Source: InterPro
  2. sequence-specific DNA binding transcription factor activityInferred from electronic annotationi Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotations

Keywords - Ligandi

DNA-bindingSAAS annotations

Names & Taxonomyi

Protein namesi
Submitted name:
Response regulator VieAImported
Gene namesi
Name:vieAImported
Ordered Locus Names:VC0395_A1258Imported, VC395_1769Imported
OrganismiVibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)Imported
Taxonomic identifieri345073 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

PTM / Processingi

Keywords - PTMi

PhosphoproteinSAAS annotations

Interactioni

Protein-protein interaction databases

STRINGi345073.VC0395_A1258.

Family & Domainsi

Sequence similaritiesi

Contains HTH luxR-type DNA-binding domain.SAAS annotations
Contains response regulatory domain.SAAS annotations

Phylogenomic databases

eggNOGiCOG2204.
HOGENOMiHOG000218159.
KOiK13246.
OMAiGEDHFLE.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.20.20.450. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00052. EAL. 1 hit.
SM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5F7M6-1 [UniParc]FASTA

« Hide

MKIMIVEDDR IQATSLKLKL RQLGLDDVIL AENGFAALEL CNKVGIDLMF    50
CDIRMPQMDG ISLLSQLSLQ APKLGVVILS AVEDTILELT HNMCSLAGFA 100
YVDRLPKPYE VEDLQRVVEG FQKQTEPETS HKPAITLTCD EIEQAFLHDH 150
IFNYYQPQFD FRSGAMVGVE ALVRYEHPTH GMLSPAVFLP LIEQCGLHEK 200
LFLTVLEKSV SALASIGADL QLSVNISQRN LQHSICDPIL AICERYGFPA 250
SKLTLEMTEH EVYNRTPTSL ANLARLRMYG VGLSIDDFGT GYASLGQLAQ 300
LPFTELKIDR SFVHDLATNY KHQQLTNMCL LLAQSLGLHC VVEGVENEET 350
WQYLRQLGVD TCQGYYAAKP MPIAQLSELY TKNRRQCLGC QSMDDGWQIL 400
LVDNHMLSAT ALQKVLNKEE NVSKVFVAQD IEQTLHKLRD LPINLLVVES 450
RFLSTISPAA FHELLEPYYR GALLVLHDGL TAEAQEDEPK AIVVKANTLM 500
ETSSRILLQA QQSNVRPQAQ QEELAQLSER ELTVAKMLVE GLTNKEIALQ 550
LDINQKTVST YKTRIMTKLG IKSAMELVRF VTLK 584
Length:584
Mass (Da):65,564
Last modified:June 12, 2007 - v1
Checksum:i7E31E5AEBDA85443
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000627 Genomic DNA. Translation: ABQ21552.1.
CP001235 Genomic DNA. Translation: ACP09769.1.
RefSeqiYP_001217202.1. NC_009457.1.
YP_002820005.1. NC_012582.1.

Genome annotation databases

EnsemblBacteriaiABQ21552; ABQ21552; VC0395_A1258.
ACP09769; ACP09769; VC395_1769.
GeneIDi5137267.
7775638.
KEGGivco:VC0395_A1258.
vcr:VC395_1769.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000627 Genomic DNA. Translation: ABQ21552.1 .
CP001235 Genomic DNA. Translation: ACP09769.1 .
RefSeqi YP_001217202.1. NC_009457.1.
YP_002820005.1. NC_012582.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 345073.VC0395_A1258.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABQ21552 ; ABQ21552 ; VC0395_A1258 .
ACP09769 ; ACP09769 ; VC395_1769 .
GeneIDi 5137267.
7775638.
KEGGi vco:VC0395_A1258.
vcr:VC395_1769.

Phylogenomic databases

eggNOGi COG2204.
HOGENOMi HOG000218159.
KOi K13246.
OMAi GEDHFLE.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
3.20.20.450. 1 hit.
InterProi IPR011006. CheY-like_superfamily.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00563. EAL. 1 hit.
PF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view ]
PRINTSi PR00038. HTHLUXR.
SMARTi SM00052. EAL. 1 hit.
SM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view ]
SUPFAMi SSF141868. SSF141868. 1 hit.
SSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEi PS50883. EAL. 1 hit.
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Heidelberg J.
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Classical Ogawa 395 / O395 and O395Imported.
  2. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Classical Ogawa 395 / O395 and O395Imported.

Entry nameiA5F7M6_VIBC3
AccessioniPrimary (citable) accession number: A5F7M6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: July 9, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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