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Unreviewed, UniProtKB/TrEMBL O04510 (O04510_ARATH)

Last modified December 16, 2008. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    F21M12.27 protein EMBL AAB60741.1
Gene names
Ordered Locus Names: At1g09880 TAIR At1g09880
ORF Names: F21M12.27
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length631 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords

   Technical termComplete proteome

Gene Ontology (GO)

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
O04510-1 [UniParc].

Last modified July 1, 1997. Version 1.
Checksum: 9C90526E231BB508

FASTA63172,389
        10         20         30         40         50         60 
MENRFLQLTL SNPEGFVTGI QYNGIDNVLA YYTNKEYDRG YWDVVWNFPG KKAKKTKGTL 

        70         80         90        100        110        120 
DRIEATKMEV ITQNDEKIEL SFTRTWNTSS TTAVPVNIDK RFVMLQNSSG FYSYAIFERL 

       130        140        150        160        170        180 
QGWPAVELDN MRLVFKLNKK KFHYMAISDD RQRYMPVPDD RVPPRGQPLA YPEAVQLLDP 

       190        200        210        220        230        240 
IEPEFKGEVD DKYEYSMESK DIKVHGWIST NDSVGFWQIT PSNEFRSAGP LKQFLGSHVG 

       250        260        270        280        290        300 
PTNLAVFHST HYVGADLIMS FKNGEAWKKV FGPVFIYLNS FPKGVDPLLL WHEAKNQTKI 

       310        320        330        340        350        360 
EEEKWPYNFT ASDDFPASDQ RGSVSGRLLV RDRFISSEDI PANGSYVGLA APGDVGSWQR 

       370        380        390        400        410        420 
ECKGYQFWSK ADENGSFSIN NVRSGRYNLY AFAPGFIGDY HNDTVFDISP GSKISLGDLV 

       430        440        450        460        470        480 
YEPPRDGSTL WEIGVPDRSA AEFYIPDPNP SFVNKLYLNH SDKYRQYGLW ERYSELYPDE 

       490        500        510        520        530        540 
DMVYNVDIDD YSKNWFFMQV TRKQANGGYK GTTWQIRFQF DDKMKNVTGN FKLRIALATS 

       550        560        570        580        590        600 
NVAELQVRVN DLSADPPLFR TEQIGRDNTI ARHGIHGLYW LYSVNVPAAS LHVGNNTIYL 

       610        620        630 
TQALATSPFQ GLMYDYIRLE YPDSINYITR S 

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References

[1]"The sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1."
Vysotskaia V.S., Osborne B.I., Toriumi M., Yu G., Oji O., Shen Y.K., Araujo R., Au M., Buehler E., Conway A.B., Conway A.R., Dewar K., Feng J., Kim C., Kurtz D., Li Y., Shinn P., Sun H. expand/collapse author list , Davis R.W., Ecker J.R., Federspiel N.A., Theologis A.
Submitted (MAY-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]Theologis
Submitted (JUN-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AC000132 Genomic DNA. Translation: AAB60741.1.
PIRB86233.
RefSeqNP_172459.1.
UniGeneAt.51541

3D structure databases

ModBaseSearch...

Proteomic databases

PRIDEO04510.

Genome annotation databases

GeneID837520.
GenomeReviewsGene locus AT1G09880 in contig CT485782_GR.
KEGGath:AT1G09880.
NMPDRfig|3702.1.peg.1222.

Organism-specific databases

TAIRAt1g09880.

Family and domain databases

InterProIPR010325. Rhamnogal_lyase.
[Graphical view]
PfamPF06045. Rhamnogal_lyase. 1 hit.
[Graphical view]

Entry information

Entry nameO04510_ARATH
AccessionPrimary (citable) accession number: O04510
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: December 16, 2008
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information