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Unreviewed, UniProtKB/TrEMBL O05937 (O05937_PSESP)

Last modified July 22, 2008. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Alginate lyase EMBL BAA19848.1
Gene names
Name: alyll EMBL BAA19848.1
OrganismPseudomonas sp. EMBL BAA19848.1
Taxonomic identifier306 [NCBI]
Taxonomic lineageBacteriaProteobacteria

Protein attributes

Sequence length713 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords

   Molecular functionLyase

Gene Ontology (GO)

   Molecular functionlyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
O05937-1 [UniParc].

Last modified July 1, 1997. Version 1.
Checksum: 2CE6CD2895899F2E

FASTA71379,805
        10         20         30         40         50         60 
MNYLKKVVLV SFCAFFSLSL MAQTHPSIML TKANVAAVKK GVNTYPLLRQ SYQAVKNAAD 

        70         80         90        100        110        120 
KALAQPIVVP VPKDGGGGYT HEQHKKNYSN MLNCGVAYQI SGEKKYADYV KNVMLNYASQ 

       130        140        150        160        170        180 
YGKWPLHPKR KSEEDGGRIF WQSLNDFVWQ LYTIQAYDLV YDGIPATDRK TIEEKLFVPI 

       190        200        210        220        230        240 
LKFFTEDRYD VFNKIHNHGT WNLAAVGITG YVLNKREYVE MAIKGSKKDG KTGYLAQIDQ 

       250        260        270        280        290        300 
LFSPDGYYME GPYYQRYALL PFVLFAKAIN NYEPSRKIFE YRDKLLSKAI HTSLQTSYTD 

       310        320        330        340        350        360 
KTFFPLNDAI KDKTYESVEL VYGVDLAYAD IKAEVDLLDI ARQQNRVIVS DAGLKVAADL 

       370        380        390        400        410        420 
AAGKAVPFKY QTLWIRDGGK GDEGGLGILR NGPNTDQQCV VLKAASQGMG HGHFDRLNLL 

       430        440        450        460        470        480 
FYDNTTEIFP DYGAARFLNI DTKNGGGYLP ENNTWAKQTV AHNALVVDQT SHFNAKLGPA 

       490        500        510        520        530        540 
DKASPTLLYF SNQPNLKVVS AKEDKAYTDV TMLRTSALVK VEGLDKPLLI DVMQAQSAKS 

       550        560        570        580        590        600 
HQYDLPFWYK GQLVNTSFPV TAKANQLTAL GDKNGYQHIW LNASNPLEGK SGMVGLLNKN 

       610        620        630        640        650        660 
RFYTTHFVSD NPLEVKLLSI GANDPEMNLV DGKAFMLSSS GQNQTFVSIT ETHGGTDPIN 

       670        680        690        700        710 
ETVSSALPTV SGLKLIKSDA QQTIISFKVN ERTYTYQINY TEKQQLYIIK IKE 

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References

[1]"Nucleotide sequence and expression of a gene (alyII) for an alginate lyase from Pseudomonas sp. OS-ALG-9."
Kraiwattanapong J., Ooi T., Kinoshita S.
Submitted (APR-1997) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: OS-ALG-9 EMBL BAA19848.1.
[2]"Cloning and sequence analysis of the gene (alyII) coding for an alginate lyase of Pseudomonas sp. OS-ALG-9."
Kraiwattanapong J., Ooi T., Kinoshita S.
Biosci. Biotechnol. Biochem. 61:1853-1857(1997) [PubMed: 9404064] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AB003330 Genomic DNA. Translation: BAA19848.1.
PIRJC5870.

3D structure databases

ModBaseSearch...

Family and domain databases

InterProIPR012480. Hepar_II_III.
[Graphical view]
PfamPF07940. Hepar_II_III. 1 hit.
[Graphical view]

Entry information

Entry nameO05937_PSESP
AccessionPrimary (citable) accession number: O05937
Entry history
Integrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 1, 1997
Last modified: July 22, 2008
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information