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Reviewed, UniProtKB/Swiss-Prot O13529 (ECM12_YEAST)

Last modified November 25, 2008. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Protein ECM12
Alternative name(s):
    Extracellular mutant protein 12
Gene names
Name: ECM12
Ordered Locus Names: YHR021W-A
OrganismSaccharomyces cerevisiae (Baker's yeast) [Complete proteome]
Taxonomic identifier4932 [NCBI]
Taxonomic lineageEukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Saccharomycetaceae › Saccharomyces

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Protein attributes

Sequence length151 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Function

May be involved in cell wall organization and biogenesis.

Subcellular location

Membrane; Multi-pass membrane proteinPotential.

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Ontologies

Keywords

   Biological processCell wall biogenesis/degradation
   Cellular componentMembrane
   DomainTransmembrane
   PTMGlycoprotein
   Technical termComplete proteome

Gene Ontology (GO)

   Biological processcell wall organization Ref.2

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 151151Protein ECM12
PRO_0000239641

Regions

Transmembrane17 – 3721 Potential
Transmembrane51 – 7121 Potential

Amino acid modifications

Glycosylation21N-linked (GlcNAc...) Potential
Glycosylation1321N-linked (GlcNAc...) Potential
Glycosylation1371N-linked (GlcNAc...) Potential

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Sequences

Sequence LengthMass (Da)Tools
O13529-1 [UniParc].

Last modified January 1, 1998. Version 1.
Checksum: 8F36494519BE7DF0

FASTA15117,435
        10         20         30         40         50         60 
MNRSFHFLIK YIYIHVLLVF YFHIKQQAIM PFFIFFFSSF DGLSFDLRVV AFLAKHVFVG 

        70         80         90        100        110        120 
VCSPFFVVGF FGSSRVVVTE WLSKLVLPPP PVSITQVFSL SRKRGEFSSG YILIINPYKS 

       130        140        150 
FLRSLLDFSI FNNTAKNKSS TFTLNLEDVS K

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References

« Hide 'large scale' references
[1]"Complete nucleotide sequence of Saccharomyces cerevisiae chromosome VIII."
Johnston M., Andrews S., Brinkman R., Cooper J., Ding H., Dover J., Du Z., Favello A., Fulton L., Gattung S., Geisel C., Kirsten J., Kucaba T., Hillier L.W., Jier M., Johnston L., Langston Y., Latreille P. expand/collapse author list , Louis E.J., Macri C., Mardis E., Menezes S., Mouser L., Nhan M., Rifkin L., Riles L., St Peter H., Trevaskis E., Vaughan K., Vignati D., Wilcox L., Wohldman P., Waterston R., Wilson R., Vaudin M.
Science 265:2077-2082(1994) [PubMed: 8091229] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 204511 / S288c / AB972.
[2]"Large scale identification of genes involved in cell surface biosynthesis and architecture in Saccharomyces cerevisiae."
Lussier M., White A.-M., Sheraton J., di Paolo T., Treadwell J., Southard S.B., Horenstein C.I., Chen-Weiner J., Ram A.F.J., Kapteyn J.C., Roemer T.W., Vo D.H., Bondoc D.C., Hall J., Zhong W.-W., Sdicu A.-M., Davies J., Klis F.M., Robbins P.W., Bussey H.
Genetics 147:435-450(1997) [PubMed: 9335584] [Abstract]
Cited for: IDENTIFICATION.

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Cross-references

Sequence databases

U10399 Genomic DNA. Translation: AAB68882.1.
PIRS52598.
RefSeqNP_011886.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

EnsemblYHR021W-A. Saccharomyces cerevisiae. [Contig view]
GeneID856416.
GenomeReviewsGene locus YHR021W-A in contig U00093_GR.
KEGGsce:YHR021W-A.
NMPDRfig|4932.3.peg.3031.

Organism-specific databases

CYGDYHR021w-a.
SGDS000003531. ECM12.

Phylogenomic databases

HOGENOMO13529.

Gene expression databases

ArrayExpressO13529.
GermOnlineYHR021W-A. Saccharomyces cerevisiae.

Family and domain databases

ProtoNetSearch...

Other Resources

LinkHubO13529.
NextBio981976.

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Entry information

Entry nameECM12_YEAST
AccessionPrimary (citable) accession number: O13529
Entry history
Integrated into UniProtKB/Swiss-Prot: June 13, 2006
Last sequence update: January 1, 1998
Last modified: November 25, 2008
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

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Relevant documents

Yeast

Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD

Yeast chromosome VIII

Yeast (Saccharomyces cerevisiae) chromosome VIII: entries and gene names

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents