Reviewed, UniProtKB/Swiss-Prot O13640 (YGWH_SCHPO)

Names and origin

Protein names

Recommended name:
    Uncharacterized alpha-1,2-galactosyltransferase C8D2.17
    EC=2.4.1.-

Gene names

ORF Names:

SPBC8D2.17, pi048

Organism

Schizosaccharomyces pombe (Fission yeast) [Complete proteome]

Taxonomic identifier

4896 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces

Protein attributes

Sequence length	351 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Subcellular location	Endoplasmic reticulum membrane; Single-pass membrane protein. Ref.3
Sequence similarities	Belongs to the glycosyltransferase 34 family.

Ontologies

Keywords
Cellular component	Endoplasmic reticulum Membrane
Domain	Signal Transmembrane
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	endoplasmic reticulum membrane Inferred from electronic annotation. Source: UniProtKB-SubCell integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular function	transferase activity, transferring hexosyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 32	32	Potential
	Chain	33 – 351	319	Uncharacterized alpha-1,2-galactosyltransferase C8D2.17		PRO_0000339339
Regions
	Topological domain	33 – 301	269	Cytoplasmic Potential
	Transmembrane	302 – 322	21	Potential
	Topological domain	323 – 351	29	Lumenal Potential
	Compositional bias	28 – 86	59	Ser-rich

Sequences

	Sequence		Length	Mass (Da)
	O13640-1 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 2F650F04DBA969CC	FASTA	351	39,766
	10 20 30 40 50 60 MFNFRLFSRR GKSLGLLAIV LLLFGFYSLK SSMPVYSNSI GSPSAHSSSY KGVSKAKTSP 70 80 90 100 110 120 QDPDSVVMLI VSFDDHYDSS RSDSSSVFLD KVLSDRTEYA LRHGYTLVHK KARDIQARYG 130 140 150 160 170 180 VYGTWSIIPA LRETLAEYPD AGWIWLLDAK AVIMNPSESL KDRVLKPEKL SQHLLLNSPI 190 200 210 220 230 240 DPLKNYIRTR RKMDPSDVFV ITTSDYNGIS TRSLLIKNNN FAPFLLDAWN EPLLKSAGFD 250 260 270 280 290 300 QAERSALSHL LEAHNTILDH VALVSPKVLN SYTNSAVDLN YEEGDFLVIL QDCENAAACE 310 320 330 340 350 RIFEYVFYLS SWSLVFLLTL PATTINRENF QPLKSSFRKK RLMNNRRLVL S

References

[1]	"A 38 kb segment containing the cdc2 gene from the left arm of fission yeast chromosome II: sequence analysis and characterization of the genomic DNA and cDNAs encoded on the segment." Machida M., Yamazaki S., Kunihiro S., Tanaka T., Kushida N., Jinno K., Haikawa Y., Yamazaki J., Yamamoto S., Sekine M., Oguchi A., Nagai Y., Sakai M., Aoki K., Ogura K., Kudoh Y., Kikuchi H., Zhang M.Q., Yanagida M. Yeast 16:71-80(2000) [PubMed: 10620777] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 38366 / 972.
[2]	"The genome sequence of Schizosaccharomyces pombe." Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P. Nature 415:871-880(2002) [PubMed: 11859360] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 38366 / 972.
[3]	"ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe." Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M. Nat. Biotechnol. 24:841-847(2006) [PubMed: 16823372] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Cross-references

Sequence databases
EMBLGenBankDDBJ	AB004537 Genomic DNA. Translation: BAA21428.1. CU329671 Genomic DNA. Translation: CAA17832.1.
PIR	T40762.
RefSeq	NP_595579.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	2541250.
KEGG	spo:SPBC8D2.17.
Organism-specific databases
GeneDB_Spombe	SPBC8D2.17.
Gene expression databases
ArrayExpress	O13640.
Family and domain databases
InterPro	IPR008630. Glyco_trans_34. [Graphical view]
Pfam	PF05637. Glyco_transf_34. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YGWH_SCHPO

Accession

Primary (citable) accession number: O13640

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 10, 2008
Last sequence update:	January 1, 1998
Last modified:	November 25, 2008
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

FPAP (Fungal Proteome Annotation Project)