Reviewed, UniProtKB/Swiss-Prot O13856 (YEX2_SCHPO)

Names and origin

Protein names

Recommended name:
    Uncharacterized WD repeat-containing protein C1A6.02

Gene names

ORF Names:

SPAC1A6.02, SPAC23C4.21

Organism

Schizosaccharomyces pombe (Fission yeast) [Complete proteome]

Taxonomic identifier

4896 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces

Protein attributes

Sequence length	361 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Subcellular location	Nucleus › nucleolus. Ref.2
Sequence similarities	Contains 6 WD repeats.

Ontologies

Keywords
Cellular component	Nucleus
Domain	Repeat WD repeat
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	nucleolus Ref.2 Inferred from direct assay. Source: GeneDB_SPombe
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 361	361	Uncharacterized WD repeat-containing protein C1A6.02		PRO_0000051486
Regions
	Repeat	57 – 96	40	WD 1
	Repeat	103 – 142	40	WD 2
	Repeat	146 – 184	39	WD 3
	Repeat	187 – 229	43	WD 4
	Repeat	237 – 275	39	WD 5
	Repeat	280 – 318	39	WD 6

Sequences

	Sequence		Length	Mass (Da)
	O13856-1 [UniParc]. Last modified January 1, 1998. Version 1. Checksum: 38DD785710325C03	FASTA	361	39,780
	10 20 30 40 50 60 MGGTINAAIK QKFENEIFDL ACFGENQVLL GFSNGRVSSY QYDVAQISLV EQWSTKRHKK 70 80 90 100 110 120 SCRNISVNES GTEFISVGSD GVLKIADTST GRVSSKWIVD KNKEISPYSV VQWIENDMVF 130 140 150 160 170 180 ATGDDNGCVS VWDKRTEGGI IHTHNDHIDY ISSISPFEER YFVATSGDGV LSVIDARNFK 190 200 210 220 230 240 KPILSEEQDE EMTCGAFTRD QHSKKKFAVG TASGVITLFT KGDWGDHTDR ILSPIRSHDF 250 260 270 280 290 300 SIETITRADS DSLYVGGSDG CIRLLHILPN KYERIIGQHS SRSTVDAVDV TTEGNFLVSC 310 320 330 340 350 360 SGTELAFWPV DQKEGDESSS SDNLDSDEDS SSDSEFSSPK KKKKVGNQGK KPLGTDFFDG L

References

[1]

"The genome sequence of Schizosaccharomyces pombe." Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. , Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S., Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S., Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D., Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P., Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K., O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M., Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N., Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A., Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R., Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A., Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A., Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H., Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S., Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C., Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A., Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M., del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S., Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R., Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G., Nurse P. Nature 415:871-880(2002) [PubMed: 11859360] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 38366 / 972.

[2]

"ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe." Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S., Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S., Yoshida M. Nat. Biotechnol. 24:841-847(2006) [PubMed: 16823372] [Abstract] Cited for: SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CU329670 Genomic DNA. Translation: CAB16892.2.
PIR	T38005.
RefSeq	XP_001713048.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	3361484.
KEGG	spo:SPAC1A6.02.
Organism-specific databases
GeneDB_Spombe	SPAC1A6.02.
Gene expression databases
ArrayExpress	O13856.
Family and domain databases
InterPro	IPR015943. WD40/YVTN_repeat-like. IPR001680. WD40_repeat. IPR017422. WD_repeat_p55. [Graphical view]
Gene3D	G3DSA:2.130.10.10. WD40/YVTN_repeat-like. 1 hit.
Pfam	PF00400. WD40. 1 hit. [Graphical view]
PIRSF	PIRSF038169. WD_repeat_p55. 1 hit.
SMART	SM00320. WD40. 5 hits. [Graphical view]
PROSITE	PS00678. WD_REPEATS_1. False negative. PS50082. WD_REPEATS_2. False negative. PS50294. WD_REPEATS_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

YEX2_SCHPO

Accession

Primary (citable) accession number: O13856
Secondary accession number(s): Q1K9B5

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 16, 2004
Last sequence update:	January 1, 1998
Last modified:	September 2, 2008
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

FPAP (Fungal Proteome Annotation Project)