Unreviewed, UniProtKB/TrEMBL O17560 (O17560_CAEEL)

Names and origin

Protein names

Submitted name:
    Protein C03E10.4, confirmed by transcript evidence EMBL CAB03823.2

Gene names

Name:	gly-20 WormBase WBGene00001645
ORF Names:	C03E10.4 EMBL CAB03823.2

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	487 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	oligosaccharide biosynthetic process Inferred from electronic annotation. Source: InterPro
Cellular component	Golgi stack Inferred from electronic annotation. Source: InterPro integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O17560-1 [UniParc]. Last modified June 1, 2001. Version 2. Checksum: 7599AFA7C6DD6753	FASTA	487	56,241
	10 20 30 40 50 60 MMVYRRMHRL ANAVIACCLF GFIVIFLKAP GEDQRLRDGV PVLSQNPVWS VNDWNGLNKE 70 80 90 100 110 120 VVDLLKNESN RLSINEKPDL SGWNFKTKED MSLKGSEIVE SVSFLNENFD ILNAAKFGDL 130 140 150 160 170 180 STVKTILVIQ VHDRPVYLQY LIESMRNTKG IEDTLLVFSH DINVGIINEM IRNITFARVY 190 200 210 220 230 240 QIFYPYNLQL FPTVFPGQSP SDCPEKMKRD KAQETNCSNW SSPDKYGNYR VAQLTQIKHH 250 260 270 280 290 300 WWWKMNFVFD GIVEKYSMKD PWVLLLEEDH MLAPDALHVL DIIVSNRPKY CENCEIISLG 310 320 330 340 350 360 FYLKSTNKYG QDIAHLGVHP WYSSKHNMGM ALQKNTWQKI KGCSEMFCKW DDYNWDWSLM 370 380 390 400 410 420 QISAKCLPQR FRVIFTKSPR VIHIGDCGVH THRCEAHKAL QSTQELFRQH KDLLFPTSLS 430 440 450 460 470 480 VTDTSRRSLK PSKENGGWGD IRDRQLCEIN KSPLVRVSSQ SASVLHKLLN SKIQFSSSNK TITSTTS

References

[1]	"Proteomics reveals N-linked glycoprotein diversity in Caenorhabditis elegans and suggests an atypical translocation mechanism for integral membrane proteins." Kaji H., Kamiie J., Kawakami H., Kido K., Yamauchi Y., Shinkawa T., Taoka M., Takahashi N., Isobe T. Mol. Cell. Proteomics 6:2100-2109(2007) [PubMed: 17761667] [Abstract] Cited for: GLYCOSYLATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.
[2]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	Z81458 Genomic DNA. Translation: CAB03823.2.
PIR	T18891.
RefSeq	NP_505864.1.
UniGene	Cel.6418
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	C03E10.4. Caenorhabditis elegans. [Contig view]
GeneID	179562.
KEGG	cel:C03E10.4.
NMPDR	fig|6239.3.peg.19685.
Organism-specific databases
WormBase	WBGene00001645. gly-20.
WormPep	C03E10.4. CE26613. [WorfDB]
Gene expression databases
ArrayExpress	O17560.
Family and domain databases
InterPro	IPR007754. GlcNAc_II. [Graphical view]
PANTHER	PTHR12871. MGAT2. 1 hit.
Pfam	PF05060. MGAT2. 1 hit. [Graphical view]
Other Resources
NextBio	905946.

Entry information

Entry name

O17560_CAEEL

Accession

Primary (citable) accession number: O17560

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	June 1, 2001
Last modified:	December 16, 2008
This is version 43 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)