Unreviewed, UniProtKB/TrEMBL O18302 (O18302_CAEEL)

Names and origin

Protein names

Submitted name:
    Protein ZK849.2a, partially confirmed by transcript evidence EMBL CAB05026.2

Gene names

ORF Names:

ZK849.2 WormPep ZK849.2a WormBase WBGene00014101, ZK849.2a EMBL CAB05026.2

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	414 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Sequence similarities

Contains 1 PDZ (DHR) domain. RuleBase RU003354V0

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	identical protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
itself		1	EBI-312747,EBI-312747
	O44821	1	EBI-312747,EBI-314154
	O45268	1	EBI-312747,EBI-327561
	O61858	1	EBI-312747,EBI-327213
	O62195	1	EBI-312747,EBI-315940
	P91563	1	EBI-312747,EBI-326929
	Q17659	1	EBI-312747,EBI-332413
	Q17936	1	EBI-312747,EBI-315063
	Q18529	1	EBI-312747,EBI-314884
	Q20742	1	EBI-312747,EBI-312606
	Q20956	1	EBI-312747,EBI-316348
	Q22886	1	EBI-312747,EBI-312489
	Q93654	1	EBI-312747,EBI-321590
	Q93831	1	EBI-312747,EBI-315800
	Q9GZH0	1	EBI-312747,EBI-315790
	Q9N3Z0	1	EBI-312747,EBI-315842
	Q9N5N7	1	EBI-312747,EBI-312204
	Q9UAT1	1	EBI-312747,EBI-325518
adt-2	Q19204	1	EBI-312747,EBI-312530
bath-44	Q95QX2	1	EBI-312747,EBI-332417
ces-1	Q93721	1	EBI-312747,EBI-322161
cpl-1	O45734	1	EBI-312747,EBI-315958
cyp-36A1	P90771	1	EBI-312747,EBI-316576
F10G8.8	O62399	1	EBI-312747,EBI-322231
fbl-1	O77469	1	EBI-312747,EBI-321052
gei-16	Q22534	1	EBI-312747,EBI-327642
gei-4	Q9TZ38	1	EBI-312747,EBI-329192
ing-3	Q9XWJ8	1	EBI-312747,EBI-332452
let-92	Q27498	1	EBI-312747,EBI-319655
lim-8	Q8MNT0	1	EBI-312747,EBI-324442
lir-1	Q9Y051	1	EBI-312747,EBI-320910
lst-1	P91820	1	EBI-312747,EBI-313618
nhr-111	O45521	1	EBI-312747,EBI-313236
nhr-46	Q95QR2	1	EBI-312747,EBI-331014
T08G11.4	Q94013	1	EBI-312747,EBI-331062
tag-260	P92004	1	EBI-312747,EBI-316398

Sequences

	Sequence		Length	Mass (Da)
	O18302-1 [UniParc]. Last modified March 20, 2007. Version 2. Checksum: B214519B065D2916	FASTA	414	46,318
	10 20 30 40 50 60 MSHCAACSGA RLQAQTVLRV DPESEYFECE ASAMEGGSGW TESLEKDFDK AFVSLDLLLG 70 80 90 100 110 120 EVDSDQVEIT YEGRQKMTSL SACFAQMMHK CQFMMHTISK QEKEMITMRA EVVEARAARQ 130 140 150 160 170 180 SMEKEVEQLM IQVHSLQCQL HSKTAPHESD MIKKKLETQL TQFRSELTQG LSTVCELEIA 190 200 210 220 230 240 RKECDRSKRT IQALETEVFG ARLAAKYLDK ELAGRIQQIQ LLGRNMRGVE HDRLWNQLEA 250 260 270 280 290 300 EIHLHRHKTV IRACRGRGNT KGLTAPLRHN FKSLRKRNGV GKSRKVVLSK HPHEGLGISI 310 320 330 340 350 360 TGGSEHALPI VISEIQPGQP ADRCGQVFVG DAILSVNGYD LRTVKHQEAV DILSGQVQQG 370 380 390 400 410 DLDLELVFVC PDEDSDDDGT VTIEHSDGSI YNLYSMEEPT SSRSSNNSDE SRST

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	Z82095 Genomic DNA. Translation: CAB05026.2.
PIR	T28036.
RefSeq	NP_001021877.2.
UniGene	Cel.31017
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:26387N.
IntAct	O18302. 53 interactions.
Genome annotation databases
Ensembl	ZK849.2. Caenorhabditis elegans. [Contig view]
GeneID	3565651.
KEGG	cel:ZK849.2.
Organism-specific databases
WormBase	WBGene00014101. ZK849.2.
WormPep	ZK849.2a. CE40678. [WorfDB]
Gene expression databases
ArrayExpress	O18302.
Family and domain databases
InterPro	IPR001478. PDZ/DHR/GLGF. IPR000408. Reg_chr_condens. [Graphical view]
Pfam	PF00595. PDZ. 1 hit. [Graphical view]
SMART	SM00228. PDZ. 1 hit. [Graphical view]
PROSITE	PS50106. PDZ. 1 hit. PS00626. RCC1_2. 1 hit. Uncertain. [Graphical view]
Other Resources
NextBio	957317.

Entry information

Entry name

O18302_CAEEL

Accession

Primary (citable) accession number: O18302

Entry history

Integrated into UniProtKB/TrEMBL:	January 1, 1998
Last sequence update:	March 20, 2007
Last modified:	December 16, 2008
This is version 56 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)