Protein T12D8.7, partially confirmed by transcript evidence - Caenorhabditis elegans

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Unreviewed, UniProtKB/TrEMBL O45784 (O45784_CAEEL)

Last modified December 16, 2008. Version 65. History...

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Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
Protein T12D8.7, partially confirmed by transcript evidence EMBL CAB03347.1

Gene names

Name:	taf-9 EMBL CAB03347.1
ORF Names:	T12D8.7 EMBL CAB03347.1

Organism

Caenorhabditis elegans [Complete proteome]

Taxonomic identifier

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	183 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	embryonic development ending in birth or egg hatching Inferred from mutant phenotype. Source: WormBase locomotion Inferred from mutant phenotype. Source: WormBase negative regulation of multicellular organism growth Inferred from mutant phenotype. Source: WormBase positive regulation of growth rate Inferred from mutant phenotype. Source: WormBase
Molecular function	protein binding Inferred from physical interaction. Source: IntAct
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	O18672	1	EBI-327711,EBI-318684
	Q9N582	1	EBI-327711,EBI-315836
gsy-1	Q9U2D9	1	EBI-327711,EBI-313125
nhr-31	Q18192	1	EBI-327711,EBI-319458
umps-1	Q18516	1	EBI-327711,EBI-313698

Sequences

Sequence

Length

Mass (Da)

Tools

O45784-1 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: 341FC3973CC98520
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183

20,644

        10         20         30         40         50         60 
MADTGEKDTE TTASGTDGHS KEALAVISML HECGIQEFDP RVVSMLMDVQ YAVTSKILQM 

        70         80         90        100        110        120 
SSGLSRHAEK AQIEAEDVQT AADMLGVLTT NAPDREKILQ LANDKNQQPL PQIRHNYGLK 

       130        140        150        160        170        180 
LPNDRFCQLQ QNFVYKADDS YQPMEMQQVT HQPHIIEPPT QVLRPEHVQN MLKRRAPDDD 


FDS

References

[1]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." The C. elegans sequencing consortium Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2.

Cross-references

Sequence databases
	Z81120 Genomic DNA. Translation: CAB03347.1.
PIR	T24863.
RefSeq	NP_499814.1.
UniGene	Cel.10050
3D structure databases
ModBase	Search...
Protein-protein interaction databases
DIP	DIP:27361N.
IntAct	O45784. 8 interactions.
Genome annotation databases
Ensembl	T12D8.7. Caenorhabditis elegans. [Contig view]
GeneID	176798.
KEGG	cel:T12D8.7.
NMPDR	fig\|6239.3.peg.12132.
Organism-specific databases
WormBase	WBGene00006391. taf-9.
WormPep	T12D8.7. CE16404. [WorfDB]
Gene expression databases
ArrayExpress	O45784.
Family and domain databases
InterPro	IPR009072. Histone-fold. IPR003162. TFIID-31. [Graphical view]
Gene3D	G3DSA:1.10.20.10. Histone-fold. 1 hit.
PANTHER	PTHR12075. TFIID-31. 1 hit.
Pfam	PF02291. TFIID-31kDa. 1 hit. [Graphical view]
ProDom	PD011023. TFIID-31. 1 hit. [Graphical view] [Entries sharing at least one domain]
Other Resources
NextBio	894046.

Entry information

Entry name

O45784_CAEEL

Accession

Primary (citable) accession number: O45784

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 1998
Last sequence update:	June 1, 1998
Last modified:	December 16, 2008
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information