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Reviewed, UniProtKB/Swiss-Prot O51878 (ATP6_BUCAP)

Last modified November 25, 2008. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    ATP synthase a chain
Alternative name(s):
    F-ATPase protein 6
Gene names
Name: atpB
Ordered Locus Names: BUsg_002
OrganismBuchnera aphidicola subsp. Schizaphis graminum [Complete proteome] [HAMAP]
Taxonomic identifier98794 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Buchnera

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Protein attributes

Sequence length272 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

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General annotation (Comments)

Function

Key component of the proton channel; it may play a direct role in the translocation of protons across the membrane By similarity.

Subunit structure

F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c By similarity.

Subcellular location

Cell membrane; Multi-pass membrane proteinPotential.

Sequence similarities

Belongs to the ATPase A chain family.

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 272272ATP synthase a chain
PRO_0000082050

Regions

Transmembrane41 – 6121 Potential
Transmembrane110 – 13021 Potential
Transmembrane156 – 17621 Potential
Transmembrane188 – 20821 Potential
Transmembrane222 – 24221 Potential
Transmembrane243 – 26321 Potential

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Sequences

Sequence LengthMass (Da)Tools
O51878-1 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: DCD8C7D2C98C37CC

FASTA27231,254
        10         20         30         40         50         60 
MSLEKISNPQ KYISHHLNHL QIDLCNFKFV EPGKIVSHFW VLNIDSIIFS LVLGCFFLSI 

        70         80         90        100        110        120 
FYTVAKKITT GVPNGLQASI ELIFDFIRSN VKSMYQGKNP LIAPLSLTVF VWVFLMNLMD 

       130        140        150        160        170        180 
LIPIDFFPFI SERFFHFPAM RIVPSADINI TLSMSLGVFI LILFYSVKMK GLIGFCKELT 

       190        200        210        220        230        240 
LQPFNHPVFF IFNFLLELVS LLSKPISLGL RLFGNMYSGE MIFILIAGLL PWWSQFFLNV 

       250        260        270 
PWAIFHILII SLQAFIFMVL TIVYLSMASQ SH

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References

« Hide 'large scale' references
[1]"The (F1F0) ATP synthase of Buchnera aphidicola (endosymbiont of aphids): genetic analysis of the putative ATP operon."
Clark M.A., Baumann P.
Curr. Microbiol. 35:84-89(1997) [PubMed: 9216881] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequence analysis of a 34.7-kb DNA segment from the genome of Buchnera aphidicola (endosymbiont of aphids) containing groEL, dnaA, the atp operon, gidA, and rho."
Clark M.A., Baumann L., Baumann P.
Curr. Microbiol. 36:158-163(1998) [PubMed: 9516544] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[3]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed: 12089438] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

AF008210 Genomic DNA. Translation: AAC38116.1.
AE013218 Genomic DNA. Translation: AAM67574.1.
RefSeqNP_660363.1.

3D structure databases

HSSPHSSP built from PDB template 1C17 based on UniProtKB P00855.
SMRO51878. Positions 96-266.
ModBaseSearch...

Genome annotation databases

GeneID1005812.
GenomeReviewsGene locus BUsg_002 in contig AE013218_GR.
KEGGbas:BUsg002.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMO51878.

Enzyme and pathway databases

BioCycBAPH198804:BUSG002-MON.

Family and domain databases

InterProIPR000568. ATPase_F0_A.
[Graphical view]
Gene3DG3DSA:1.20.120.220. ATPase_F0_A. 1 hit.
PANTHERPTHR11410. ATPase_F0_A. 1 hit.
PfamPF00119. ATP-synt_A. 1 hit.
[Graphical view]
PRINTSPR00123. ATPASEA.
TIGRFAMsTIGR01131. ATP_synt_6_or_A. 1 hit.
PROSITEPS00449. ATPASE_A. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameATP6_BUCAP
AccessionPrimary (citable) accession number: O51878
Entry history
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: June 1, 1998
Last modified: November 25, 2008
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

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Relevant documents

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents