Unreviewed, UniProtKB/TrEMBL O52374 (O52374_9FIRM)

Names and origin

Protein names

Submitted name:
    Family 10 xylanase EMBL AAB95326.1
    EC=3.2.1.8

Gene names

Name:

xynC EMBL AAB95326.1

Organism

Caldicellulosiruptor sp. Rt69B.1 EMBL AAB95326.1

Taxonomic identifier

70295 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacterales Family III. Incertae Sedis › Caldicellulosiruptor

Protein attributes

Sequence length	1779 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432V0

Ontologies

Keywords
Biological process	Xylan degradation
Molecular function	Glycosidase Hydrolase
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O52374-1 [UniParc]. Last modified June 1, 1998. Version 1. Checksum: CE5269B6806B5CED	FASTA	1,779	194,305
	10 20 30 40 50 60 MKKRVISILS LLFFLINTLV GTLIFHQEAK AAAYTVDFEG TDTLSFFAYG KSNIAVDMGN 70 80 90 100 110 120 AYNGKSSIRV SNRSSIWDGV AVDVKNIMNN GTTWVVSAYV KHSYQKPVAF GISAVYDDGS 130 140 150 160 170 180 GVKSTLIGEV VAIPNYWKKI VGKWTPNISN VRNLLIVVHT IVESGVDYNV DYIQIMDDNS 190 200 210 220 230 240 YLSNAVTFSS GFESGTTEGW QARGSGVTVK PDSVVAYNGK YSLYVSGRTS NWHGAQIPVD 250 260 270 280 290 300 TILEQGKVYK ISVWVYQNSG STQKMSLTMQ RRFATDPSTS YENLIYNRDV PSNTWVEPSG 310 320 330 340 350 360 SYSIPAGVTV SELLLYVEAQ NANLAFWVDD LKIYDLSKLA EPEWEIPSLI EKYKDYFKVG 370 380 390 400 410 420 VALSYKSIAS DTEKKMVLKH FNSITAGNEM KPSELLISEN NYNFSKADEF VNFATSNNIA 430 440 450 460 470 480 IRGHTLVWHE QTPDWFFKDA NGNTLSKDAL LSRLKQYIYT VVGRYKGKVY AWDVVNEAID 490 500 510 520 530 540 ESQGNGFRRS NWYNICGPEY IEKAFIWAHE ADPDAKLFYN DYNTENSQKR QFIYNMIKSL 550 560 570 580 590 600 KEKGVPIHGI GLQCHINLDW PSISEIENTI KLFSSIPGLE IHITELDMSF YQWGSSTSYS 610 620 630 640 650 660 TPPRDLLIKQ AMRYKELFDL FKKYNVITNV TFWGLKDDYS WLSQNFGKSD YPLLFDGNYK 670 680 690 700 710 720 SKYAFWSLIE PTVVPVNSTL PAPPAIQVPT PTSTPTPTPT PTVSATPTPA PTASPAGGSY 730 740 750 760 770 780 WTPSESYGAL KVWYANGNMS STTNVLNPKI KIENVGTTAV DLSRVKVRYW YTIDGEAAQS 790 800 810 820 830 840 VSVASSINPA YIDVRVVKLG ANAGGADYYV EVGFKSGAGV LAAGQSTKEI RLSIQKSSGS 850 860 870 880 890 900 YNQSNDYSVR SANSYIENEK VTGYIDDVLV WGREPGRNAQ IKVWYANGNL SSPTNVLNPK 910 920 930 940 950 960 IKIENVGTTA VDLSRVKVRY WYTIDGEATQ SVSVASSINP AYIDVRVVKL GANAGGADYY 970 980 990 1000 1010 1020 VEVGFKSGAG VLAAGQSTKE IRLSIQKSSG SYNQSNDYSV RSANSYIENE KVTGYIDDVL 1030 1040 1050 1060 1070 1080 VWGKEPSRGT KPAGEVTPAP TPTSTPTPTP TTTPAPTSAP TPSPTVTATP TPTPTPTATP 1090 1100 1110 1120 1130 1140 TPTPTTTPTP TPTPTVTVTP TPTPTGTPGT GSGLKVLYKN NETSASTGSI RPWFKIVNGG 1150 1160 1170 1180 1190 1200 SSSVDLSRVK IRYWYTVDGD KPQSAVCDWA QIGASNVTFN FVKLTSGVSG ADYYLEVGFS 1210 1220 1230 1240 1250 1260 SGAGQLQPGK DTGDIQVRFN KNDWSNYNQA DDWSWMQSMT NYGENAKVTL YVDGVLVWGQ 1270 1280 1290 1300 1310 1320 EPGGATPAPT STATPTPTPT ATVTPTPTAT PTPTPTPTAT TTPIPTPTTP PTKPVGKIPP 1330 1340 1350 1360 1370 1380 NNNPLISHKF GADPAVLVYG GRVYMYLTND ILEYDENGNV KDNSYSKINK ITVISSDDLV 1390 1400 1410 1420 1430 1440 NWTDHGEIEV AGPNGVAKWA NFSWAPAVAY KKINGKDRFF LYFGNSGGGI GVITADSPTG 1450 1460 1470 1480 1490 1500 PWSDPLGRPL ITWSTPGVQG VVWLFDPAVL VDDDGKAYIY FGGGVPQGQD AMPNTARVLQ 1510 1520 1530 1540 1550 1560 PGDDMISVVG SAATIPAPYM FEDSGINKIG NTYYYSYCTN FAQRPQGSPP AGAIAYMTGK 1570 1580 1590 1600 1610 1620 SPVGPWEYRG VILRNPGNFF GVGGNNHHQL FEFNGKWYIA YHAQTLAKDL GVAKGYRSPH 1630 1640 1650 1660 1670 1680 INQVQIENGV IKEVTADYKG VAQVKNFDPY RMVEAETFAW CAGISTKKAN ASNNMCLTGI 1690 1700 1710 1720 1730 1740 DSGDWIALSR VDFGNAGPQK FEAQVSNING KGYIELRIDS VDGRTIAVAE VLPQSGSSSQ 1750 1760 1770 WVKVEANVEN VTGVHDLYLV FRGEKKSNLF DMDCWRFVR

References

[1]	"Family 10 and 11 xylanase genes from Caldicellulosiruptor sp. strain Rt69B.1." Morris D.D., Gibbs M.D., Ford M., Thomas J., Bergquist P.L. Extremophiles 3:103-111(1999) [PubMed: 10356996] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Rt69B.1 EMBL AAB95326.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF036924 Genomic DNA. Translation: AAB95326.1.
PIR	T31085.
3D structure databases
HSSP	HSSP built from PDB template 1NBC based on UniProtKB Q06851.
ModBase	Search...
Family and domain databases
InterPro	IPR001956. CBD_3. IPR005084. CBM_6. IPR006584. Cellulose_bd_IV. IPR003305. CenC_carb_bd. IPR001000. Glyco_hydro_10. IPR006710. Glyco_hydro_43. IPR013781. Glyco_hydro_sub_cat. [Graphical view]
Gene3D	G3DSA:2.60.40.710. CBD_3. 3 hits. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR22925. Glyco_hydro_43. 1 hit.
Pfam	PF00942. CBM_3. 3 hits. PF02018. CBM_4_9. 2 hits. PF03422. CBM_6. 1 hit. PF00331. Glyco_hydro_10. 1 hit. PF04616. Glyco_hydro_43. 2 hits. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
ProDom	PD001947. CBD_3. 3 hits. [Graphical view] [Entries sharing at least one domain]
SMART	SM00606. CBD_IV. 1 hit. SM00633. Glyco_10. 1 hit. [Graphical view]
PROSITE	PS51172. CBM3. 3 hits. PS51175. CBM6. 1 hit. PS00591. GLYCOSYL_HYDROL_F10. 1 hit. [Graphical view]

Entry information

Entry name

O52374_9FIRM

Accession

Primary (citable) accession number: O52374

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 1998
Last sequence update:	June 1, 1998
Last modified:	July 22, 2008
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)