Reviewed,
UniProtKB/Swiss-Prot O75179 (ANR17_HUMAN)
Last modified
September 2, 2008.
Version 55.
History...
Clusters with 100%,
90%,
50% identity |
Documents (5) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Ankyrin repeat domain-containing protein 17 Alternative name(s): Gene trap ankyrin repeat protein Serologically defined breast cancer antigen NY-BR-16 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 2603 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Earliest specific in situ marker of hepatic differentiation during embryogenesis, useful for characterization of inductive events involved in hepatic specification By similarity. Target of enterovirus 71 which is the major etiological agent of HFMD (hand, foot and mouth disease). |
| Subunit structure | Interacts with VP1 capsid protein of enterovirus 71 (EV71). |
| Subcellular location | |
| Tissue specificity | Expressed in bone marrow. |
| Sequence similarities | Contains 25 ANK repeats. Contains 1 KH domain. |
| Sequence caution | The sequence AAG48253.1 differs from that shown. Reason: Frameshift at several positions. The sequence AAH04173.1 differs from that shown. Reason: Miscellaneous discrepancy. Contaminating sequence. Potential poly-A sequence. The sequence AAH04891.1 differs from that shown. Reason: Erroneous translation. The sequence AAH04891.1 differs from that shown. Reason: Miscellaneous discrepancy. Contaminating sequence. Potential poly-A sequence. The sequence BAB15260.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended. The sequence BAB15260.1 differs from that shown. Reason: Miscellaneous discrepancy. Contaminating sequence. Potential poly-A sequence. |
Ontologies
Keywords | |
|---|---|
| Biological process | Host-virus interaction |
| Cellular component | Cytoplasm Nucleus |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | ANK repeat Coiled coil Repeat |
| Ligand | RNA-binding |
| PTM | Phosphoprotein |
Gene Ontology (GO) | |
| None. [Check GOA] | |
Alternative products
| This entry describes 5 isoforms produced by alternative splicing. [Align] [Select] | |||||
| Isoform 1 (identifier: O75179-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | |||||
| Isoform 2 (identifier: O75179-2) The sequence of this isoform differs from the canonical sequence as follows: 1028-1028: Missing. | |||||
| Isoform 3 (identifier: O75179-3) The sequence of this isoform differs from the canonical sequence as follows: 1176-1187: KEHRNVSDYTPL → YRSTGMVLITHL 1188-2603: Missing. | |||||
| Notes: No experimental confirmation available. | |||||
| Isoform 4 (identifier: O75179-4) The sequence of this isoform differs from the canonical sequence as follows: 982-1010: GVIVGQPVLGQAQLAGLGQGILTETQQGL → VLSSLLQPCFLSTLPLILMHRLRVIMTRR 1011-1603: Missing. | |||||
| Notes: No experimental confirmation available. | |||||
| Isoform 5 (identifier: O75179-5) The sequence of this isoform differs from the canonical sequence as follows: 742-751: NRAPRVPVQA → TDNIFPRLVC 752-2603: Missing. | |||||
| Notes: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | ||||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 2603 | 2603 | Ankyrin repeat domain-containing protein 17 | |||||
Regions | ||||||||
| Repeat | 233 – 262 | 30 | ANK 1 | |||||
| Repeat | 266 – 295 | 30 | ANK 2 | |||||
| Repeat | 300 – 329 | 30 | ANK 3 | |||||
| Repeat | 333 – 362 | 30 | ANK 4 | |||||
| Repeat | 366 – 395 | 30 | ANK 5 | |||||
| Repeat | 400 – 429 | 30 | ANK 6 | |||||
| Repeat | 433 – 462 | 30 | ANK 7 | |||||
| Repeat | 466 – 495 | 30 | ANK 8 | |||||
| Repeat | 499 – 528 | 30 | ANK 9 | |||||
| Repeat | 533 – 562 | 30 | ANK 10 | |||||
| Repeat | 563 – 592 | 30 | ANK 11 | |||||
| Repeat | 596 – 625 | 30 | ANK 12 | |||||
| Repeat | 629 – 658 | 30 | ANK 13 | |||||
| Repeat | 663 – 692 | 30 | ANK 14 | |||||
| Repeat | 696 – 725 | 30 | ANK 15 | |||||
| Repeat | 1082 – 1111 | 30 | ANK 16 | |||||
| Repeat | 1115 – 1144 | 30 | ANK 17 | |||||
| Repeat | 1149 – 1178 | 30 | ANK 18 | |||||
| Repeat | 1182 – 1211 | 30 | ANK 19 | |||||
| Repeat | 1217 – 1246 | 30 | ANK 20 | |||||
| Repeat | 1251 – 1280 | 30 | ANK 21 | |||||
| Repeat | 1284 – 1313 | 30 | ANK 22 | |||||
| Repeat | 1319 – 1348 | 30 | ANK 23 | |||||
| Repeat | 1352 – 1381 | 30 | ANK 24 | |||||
| Repeat | 1385 – 1414 | 30 | ANK 25 | |||||
| Domain | 1725 – 1789 | 65 | KH | |||||
| Coiled coil | 1442 – 1526 | 85 | Potential | |||||
| Compositional bias | 96 – 110 | 15 | Gly-rich | |||||
| Compositional bias | 858 – 1008 | 151 | Gln-rich | |||||
| Compositional bias | 1603 – 1700 | 98 | Ser-rich | |||||
| Compositional bias | 1950 – 2106 | 157 | Ser-rich | |||||
| Compositional bias | 1966 – 2033 | 68 | Thr-rich | |||||
Amino acid modifications | ||||||||
| Modified residue | 1333 | 1 | Phosphotyrosine | |||||
| Modified residue | 2042 | 1 | Phosphoserine | |||||
| Modified residue | 2045 | 1 | Phosphoserine | |||||
| Modified residue | 2047 | 1 | Phosphoserine | |||||
| Modified residue | 2059 | 1 | Phosphoserine | |||||
| Modified residue | 2067 | 1 | Phosphoserine | |||||
Natural variations | ||||||||
| Alternative sequence | 742 – 751 | 10 | NRAPRVPVQA → TDNIFPRLVC in isoform 5. | |||||
| Alternative sequence | 752 – 2603 | 1852 | Missing in isoform 5. | |||||
| Alternative sequence | 982 – 1010 | 29 | GVIVG…TQQGL → VLSSLLQPCFLSTLPLILMH RLRVIMTRR in isoform 4. | |||||
| Alternative sequence | 1011 – 1603 | 593 | Missing in isoform 4. | |||||
| Alternative sequence | 1028 | 1 | Missing in isoform 2. | |||||
| Alternative sequence | 1176 – 1187 | 12 | KEHRN…DYTPL → YRSTGMVLITHL in isoform 3. | |||||
| Alternative sequence | 1188 – 2603 | 1416 | Missing in isoform 3. | |||||
| Natural variant | 2560 | 1 | H → Y: dbSNP rs2306059. | |||||
Experimental info | ||||||||
| Sequence conflict | 304 | 1 | P → S in BAA31672. Ref.4 | |||||
| Sequence conflict | 705 | 1 | A → P in AAG48253. Ref.1 | |||||
| Sequence conflict | 713 | 1 | V → G in AAG48253. Ref.1 | |||||
| Sequence conflict | 1137 | 1 | D → G in BAB15260. Ref.7 | |||||
| Sequence conflict | 1163 | 1 | Q → P in AAG48253. Ref.1 | |||||
| Sequence conflict | 1391 | 1 | Missing in CAD38571. Ref.6 | |||||
Sequences
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Clusters with