Unreviewed, UniProtKB/TrEMBL O85007 (O85007_9LACO)

Names and origin

Protein names

Submitted name:
    Alpha-amylase EMBL AAC24760.1

Gene names

Name:

amyA EMBL AAC24760.1

Encoded on

Plasmid unnamed EMBL AAC24760.1

Organism

Lactobacillus manihotivorans EMBL AAC24760.1

Taxonomic identifier

88233 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	479 AA.
Sequence status	Fragment.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615V0

Ontologies

Keywords
Technical term	Plasmid
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	479	1	EMBL AAC24760.1

Sequences

	Sequence		Length	Mass (Da)
	O85007-1 [UniParc]. Last modified November 1, 1998. Version 1. Checksum: E13EFB4062C6BBEB	FASTA	479	52,859
	10 20 30 40 50 60 MKKKKSFWLV SFLVIVASVF FISFGLSNHS KQVVQADSDT TSTDDSSNDT ADSVSDGVIL 70 80 90 100 110 120 HAWCWSFNTI KNNLKQIHDA GYTTVQTSPV NEVKVGNSAS KSLNNWYWLY QPTKYSIGNY 130 140 150 160 170 180 YLGTEAEFKS MCAAAKEYNI RIIVEATLND TTSDYRQFSV EIKSISNWTH GNTQISNWSI 190 200 210 220 230 240 REDVTQNSLL GLYGLNAQNS QVQTYLKNYL ERLISDGASG FRYDAAKHIE LPSQYDGSYG 250 260 270 280 290 300 SNFWPNITDN GSEFQYGEVL QDSISKESDY ANYMSVTASN YGNTIRNALK NRDFTASTLQ 310 320 330 340 350 360 NFNISVPASK LVTWVESHDN YANDDQVSTR MNSSDIKLGW AVVASRSGSV PLFFDRPVDG 370 380 390 400 410 420 GNGTRFPGSS EIGDAGSSLY YDKAVVAVNK FHNAMAGQSE YISNPNGNTK IFENERGSKG 430 440 450 460 470 VVFANASDSS YSLNVKTSLA DGTYENKAGS DEFTVKNGYL TGTIQGREVV VLYGDPTSS

References

[1]

"Detection of conserved alpha-amylase genes in lactobacilli. Evidence for plasmid-associated amylase activity in two new Lactobacillus sp. strains LMG 18010 and LMG 18011." Morlon-Guyot J., Jacobe de Haut I., Boniface J., Raimbault M., Guyot J.P. Submitted (OCT-1997) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: OND 32 EMBL AAC24760.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF031369 Genomic DNA. Translation: AAC24760.1.
3D structure databases
HSSP	HSSP built from PDB template 1BAG based on UniProtKB P00691.
ModBase	Search...
Family and domain databases
InterPro	IPR006048. A-amylase_b_C. IPR006046. Glyco_hydro_13. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat. IPR013781. Glyco_hydro_sub_cat. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02806. Alpha-amylase_C. 1 hit. [Graphical view]
PRINTS	PR00110. ALPHAAMYLASE.
SMART	SM00632. Aamy_C. 1 hit. [Graphical view]

Entry information

Entry name

O85007_9LACO

Accession

Primary (citable) accession number: O85007

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1998
Last sequence update:	November 1, 1998
Last modified:	July 22, 2008
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)