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Unreviewed, UniProtKB/TrEMBL O87264 (O87264_PSESX)

Last modified October 14, 2008. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    HrpW EMBL AAC62526.1
Gene names
Name: hrpW EMBL AAC62526.1
OrganismPseudomonas syringae EMBL AAC62526.1
Taxonomic identifier317 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

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Protein attributes

Sequence length424 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

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Ontologies

Gene Ontology (GO)

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectate lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
O87264-1 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: 7AF4ED059BE79D2E

FASTA42442,911
        10         20         30         40         50         60 
MSIGITPRPQ QTTTPLDFSA LSGKSPQPNT FGEQNTQQAI DPSALLFGSD TQKDVNFGTP 

        70         80         90        100        110        120 
DSTVQNPQDA SKPNDSQSNI AKLISALIMS LLQMLTNSNK KQDTNQEQPD SQAPFQNNGG 

       130        140        150        160        170        180 
LGTPSADSGG GGTPDATGGG GGDTPSATGG GGGDTPTATG GGGSGGGGTP TATGGGSGGT 

       190        200        210        220        230        240 
PTATGGGEGG VTPQITPQLA NPNRTSGTGS VSDTAGSTEQ AGKINVVKDT IKVGAGEVFD 

       250        260        270        280        290        300 
GHGATFTADK SMGNGDQGEN QKPMFELAEG ATLKNVNLGE NEVDGIHVKA KNAQEVTIDN 

       310        320        330        340        350        360 
VHAQNVGEDL ITVKGEGGAA VTNLNIKNSS AKGADDKVVQ LNANTHLKID NFKADDFGTM 

       370        380        390        400        410        420 
VRTNGGKQFD DMSIELNGIE ANHGKFALVK SDSDDLKLAT GNIAMTDVKH AYDKTQASTQ 


HTEL

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References

[1]"The Pseudomonas syringae pv. tomato HrpW protein has domains similar to harpins and pectate lyases and can elicit the plant hypersensitive response and bind to pectate."
Charkowski A.O., Alfano J.R., Preston G., Yuan J., He S.Y., Collmer A.
J. Bacteriol. 180:5211-5217(1998) [PubMed: 9748456] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DC3000 EMBL AAC62526.1.

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Cross-references

Sequence databases

AF005221 Genomic DNA. Translation: AAC62526.1.

3D structure databases

HSSPHSSP built from PDB template 1EE6 based on UniProtKB Q9RHW0.
ModBaseSearch...

Family and domain databases

InterProIPR004898. Pectate_lyase_cat.
IPR012334. Pectin_lyas_fold.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF03211. Pectate_lyase. 1 hit.
[Graphical view]

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Entry information

Entry nameO87264_PSESX
AccessionPrimary (citable) accession number: O87264
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: October 14, 2008
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information