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Reviewed, UniProtKB/Swiss-Prot P41188 (RL7_BUCAP)

Last modified July 22, 2008. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    50S ribosomal protein L7/L12
Gene names
Name: rplL
Ordered Locus Names: BUsg_036
OrganismBuchnera aphidicola subsp. Schizaphis graminum [Complete proteome] [HAMAP]
Taxonomic identifier98794 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length122 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation By similarity.

Sequence similarities

Belongs to the ribosomal protein L12P family.

Ontologies

Keywords

   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome

Gene Ontology (GO)

   Biological processtranslation

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical view

Molecule processing

Chain1 – 12212250S ribosomal protein L7/L12

Sequences

Sequence LengthMass (Da)Tools
P41188-1 [UniParc].

Last modified August 30, 2002. Version 2.
Checksum: CA7721D77FB06EC5

FASTA12213,267
        10         20         30         40         50         60 
MSITKEQILE AVSEMSVMNV VELISAMEKK FGVSANMSVN TNNNSEKSTI EEKTEFDIFL 

        70         80         90        100        110        120 
KSIGPNKVSV IKSVRSATGL GLKEAKDLVE SAPTVLKENM SKNDAESLKK TLEDAGAEIE 


IK 

« Hide

References

« Hide 'large scale' references
[1]"50 million years of genomic stasis in endosymbiotic bacteria."
Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.
Science 296:2376-2379(2002) [PubMed: 12089438] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Sequence analysis of an aphid endosymbiont DNA fragment containing rpoB (beta-subunit of RNA polymerase) and portions of rplL and rpoC."
Clark M.A., Baumann L., Baumann P.
Curr. Microbiol. 25:283-290(1992) [PubMed: 1369199] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 88-122.

Cross-references

Sequence databases

AE013218 Genomic DNA. Translation: AAM67607.1.
Z11913 Genomic DNA. Translation: CAA77969.1.
PIRS32679.
RefSeqNP_660396.2.

3D structure databases

HSSPHSSP built from PDB template 1CTF based on UniProtKB P02392.
ModBaseSearch...

Genome annotation databases

GeneID1005852.
GenomeReviewsGene locus BUsg_036 in contig AE013218_GR.
KEGGbas:BUsg036.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMP41188.

Enzyme and pathway databases

BioCycBAPH198804:BUSG036-MON.

Family and domain databases

HAMAPMF_00368.
[Tree]
InterProIPR000206. Ribosomal_L7/12.
IPR014719. Ribosomal_L7/12_C/ClpS-like.
IPR013823. Ribosomal_L7/L12_C.
[Graphical view]
Gene3DG3DSA:3.30.1390.10. Ribosomal_L7/12_C/ClpS-like. 1 hit.
PfamPF00542. Ribosomal_L12. 1 hit.
[Graphical view]
ProDomPD001326. Ribosomal_L12. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR00855. L12. 1 hit.
BLOCKSSearch...

Other Resources

ProtoNetSearch...

Entry information

Entry nameRL7_BUCAP
AccessionPrimary (citable) accession number: P41188
Entry history
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: August 30, 2002
Last modified: July 22, 2008
This is version 59 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Buchnera aphidicola (subsp. Schizaphis graminum)

Buchnera aphidicola (subsp. Schizaphis graminum): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents