Reviewed,
UniProtKB/Swiss-Prot P47741 (TNR4_MOUSE)
Last modified
July 22, 2008.
Version 68.
History...
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90%,
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Tumor necrosis factor receptor superfamily member 4 Alternative name(s): OX40L receptor OX40 antigen CD_antigen=CD134 | ||||
| Gene names |
| ||||
| Organism | Mus musculus (Mouse) | ||||
| Taxonomic identifier | 10090 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus |
Protein attributes
| Sequence length | 272 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Receptor for TNFSF4/OX40L/GP34. |
| Subunit structure | Interacts with TRAF2, TRAF3 and TRAF5 By similarity. |
| Subcellular location | |
| Sequence similarities | Contains 4 TNFR-Cys repeats. |
Ontologies
Keywords | |
|---|---|
| Cellular component | Membrane |
| Domain | Repeat Signal Transmembrane |
| Molecular function | Receptor |
| PTM | Glycoprotein |
Gene Ontology (GO) | |
| Biological process | cellular defense response Inferred from mutant phenotype. Source: MGI inflammatory responseInferred from mutant phenotype. Source: MGI negative regulation of cytokine secretionInferred from physical interaction. Source: MGI regulation of apoptosisInferred from mutant phenotype. Source: MGI regulation of protein kinase activityInferred from mutant phenotype. Source: MGI |
| Cellular component | external side of plasma membrane Inferred from direct assay. Source: MGI |
| Molecular function | tumor necrosis factor receptor activity Inferred from physical interaction. Source: MGI |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| TRAF2 | Q12933 | 1 | EBI-520001,EBI-355744 | From a different organism. |
| Traf2 | P39429 | 2 | EBI-520001,EBI-520016 | |
| Traf3 | Q60803 | 2 | EBI-520001,EBI-520135 |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | ||||||
Molecule processing | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 19 | 19 | Potential | |||||||
| Chain | 20 – 272 | 253 | Tumor necrosis factor receptor superfamily member 4 | |||||||
Regions | ||||||||||
| Topological domain | 20 – 211 | 192 | Extracellular Potential | |||||||
| Transmembrane | 212 – 236 | 25 | Potential | |||||||
| Topological domain | 237 – 272 | 36 | Cytoplasmic Potential | |||||||
| Repeat | 26 – 61 | 36 | TNFR-Cys 1 | |||||||
| Repeat | 62 – 103 | 42 | TNFR-Cys 2 | |||||||
| Repeat | 104 – 124 | 21 | TNFR-Cys 3; truncated | |||||||
| Repeat | 125 – 165 | 41 | TNFR-Cys 4 | |||||||
Amino acid modifications | ||||||||||
| Glycosylation | 144 | 1 | N-linked (GlcNAc...) Potential | |||||||
| Disulfide bond | 27 ↔ 38 | By similarity | ||||||||
| Disulfide bond | 39 ↔ 52 | By similarity | ||||||||
| Disulfide bond | 42 ↔ 60 | By similarity | ||||||||
| Disulfide bond | 63 ↔ 77 | By similarity | ||||||||
| Disulfide bond | 80 ↔ 95 | By similarity | ||||||||
| Disulfide bond | 83 ↔ 103 | By similarity | ||||||||
| Disulfide bond | 105 ↔ 123 | By similarity | ||||||||
| Disulfide bond | 126 ↔ 139 | By similarity | ||||||||
| Disulfide bond | 145 ↔ 164 | By similarity | ||||||||
Experimental info | ||||||||||
| Sequence conflict | 15 | 1 | A → G in CAA59476. Ref.2 | |||||||
Sequences
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References
| [1] | "Cloning of mouse Ox40: a T cell activation marker that may mediate T-B cell interactions." Calderhead D.M., Buhlmann J.E., van den Eertwegh A.J., Claassen E., Noelle R.J., Fell H. J. Immunol. 151:5261-5271(1993) [PubMed: 8228223] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: BALB/c. |
| [2] | "Gene structure and chromosomal localization of the mouse homologue of rat OX40 protein." Birkeland M.L., Copeland N.G., Gilbert D.J., Jenkins N.A., Barclay A.N. Eur. J. Immunol. 25:926-930(1995) [PubMed: 7737295] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| Z21674 mRNA. Translation: CAA79772.1. X85214 Genomic DNA. Translation: CAA59476.1. | |
| PIR | I48700. |
| UniGene | Mm.13885 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1JMA based on UniProtKB Q92956. |
| SMR | P47741. Positions 25-166. |
| ModBase | Search... |
Protein-protein interaction databases | |
| DIP | DIP:6239N. |
| IntAct | P47741. |
Genome annotation databases | |
| Ensembl | ENSMUSG00000029075. Mus musculus. [Contig view] |
Organism-specific databases | |
| MGI | MGI:104512. Tnfrsf4. |
Phylogenomic databases | |
| HOGENOM | P47741. |
| HOVERGEN | P47741. |
Gene expression databases | |
| ArrayExpress | P47741. |
| GermOnline | ENSMUSG00000029075. Mus musculus. |
Family and domain databases | |
| InterPro | IPR001368. TNFR_c6. [Graphical view] |
| Pfam | PF00020. TNFR_c6. 2 hits. [Graphical view] |
| SMART | SM00208. TNFR. 3 hits. [Graphical view] |
| PROSITE | PS00652. TNFR_NGFR_1. 2 hits. PS50050. TNFR_NGFR_2. 2 hits. [Graphical view] |
| ProDom | P47741. [Graphical view] [Entries sharing at least one domain] |
| BLOCKS | Search... |
Other Resources | |
| SOURCE | Search... |
| ProtoNet | Search... |
Entry information
| Entry name | TNR4_MOUSE | ||||||||
| Accession | Primary (citable) accession number: P47741 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| MGD cross-references Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot |
| SIMILARITY comments Index of protein domains and families |

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