SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P76340

- YEDW_ECOLI

UniProt

P76340 - YEDW_ECOLI

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here

Protein
Probable transcriptional regulatory protein YedW
Gene
yedW, b1969, JW5322
Organism
Escherichia coli (strain K12)
Status
Reviewed - - Experimental evidence at protein leveli

Functioni

Probable member of a two-component regulatory system YedW/YedV.

GO - Molecular functioni

  1. DNA bindingInferred from electronic annotationi Source: UniProtKB-KW
  2. phosphorelay response regulator activityInferred from electronic annotationi Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. regulation of transcription, DNA-templatedInferred from electronic annotationi Source: UniProtKB-KW
  2. transcription, DNA-templatedInferred from electronic annotationi Source: UniProtKB-KW
  1. phosphorelay response regulator activityInferred from electronic annotationi Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation, Two-component regulatory system

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciEcoCyc:G7057-MONOMER.
ECOL316407:JW5322-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable transcriptional regulatory protein YedW
Gene namesi
Name:yedW
Ordered Locus Names:b1969, JW5322
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG14045. yedW.

Subcellular locationi

Cytoplasm Inferred

GO - Cellular componenti

  1. cytoplasmInferred from electronic annotationi Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier
Chaini1 – 223223Probable transcriptional regulatory protein YedW
PRO_0000081360

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier
Modified residuei51 – 5114-aspartylphosphate By similarity

Post-translational modificationi

Phosphorylated by YedV.1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiP76340.
PRIDEiP76340.

Expressioni

Gene expression databases

GenevestigatoriP76340.

Interactioni

Protein-protein interaction databases

DIPiDIP-11853N.
IntActiP76340. 2 interactions.
MINTiMINT-1223015.
STRINGi511145.b1969.

Structurei

3D structure databases

ProteinModelPortaliP76340.
SMRiP76340. Positions 2-216.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier
Domaini1 – 115115Response regulatory

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0745.
HOGENOMiHOG000034815.
KOiK02483.
OMAiMTYDLWH.
OrthoDBiEOG6G4VQG.
PhylomeDBiP76340.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001867. Sig_transdc_resp-reg_C.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR006291. Sig_transdc_resp-reg_metal.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view]
SMARTiSM00448. REC. 1 hit.
SM00862. Trans_reg_C. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
TIGRFAMsiTIGR01387. cztR_silR_copR. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P76340-1 [UniParc]FASTA

« Hide

MKILLIEDNQ RTQEWVTQGL SEAGYVIDAV SDGRDGLYLA LKDDYALIIL    50
DIMLPGMDGW QILQTLRTAK QTPVICLTAR DSVDDRVRGL DSGANDYLVK 100
PFSFSELLAR VRAQLRQHHA LNSTLEISGL RMDSVSHSVS RDNISITLTR 150
KEFQLLWLLA SRAGEIIPRT VIASEIWGIN FDSDTNTVDV AIRRLRAKVD 200
DPFPEKLIAT IRGMGYSFVA VKK 223
Length:223
Mass (Da):25,018
Last modified:April 27, 2001 - v2
Checksum:i4A595D7430C2E2B5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00096 Genomic DNA. Translation: AAC75035.2.
AP009048 Genomic DNA. Translation: BAA15796.2.
PIRiE64961.
RefSeqiNP_416478.2. NC_000913.3.
YP_490219.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC75035; AAC75035; b1969.
BAA15796; BAA15796; BAA15796.
GeneIDi12931392.
946486.
KEGGiecj:Y75_p1936.
eco:b1969.
PATRICi32119269. VBIEscCol129921_2049.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U00096 Genomic DNA. Translation: AAC75035.2 .
AP009048 Genomic DNA. Translation: BAA15796.2 .
PIRi E64961.
RefSeqi NP_416478.2. NC_000913.3.
YP_490219.1. NC_007779.1.

3D structure databases

ProteinModelPortali P76340.
SMRi P76340. Positions 2-216.
ModBasei Search...

Protein-protein interaction databases

DIPi DIP-11853N.
IntActi P76340. 2 interactions.
MINTi MINT-1223015.
STRINGi 511145.b1969.

Proteomic databases

PaxDbi P76340.
PRIDEi P76340.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAC75035 ; AAC75035 ; b1969 .
BAA15796 ; BAA15796 ; BAA15796 .
GeneIDi 12931392.
946486.
KEGGi ecj:Y75_p1936.
eco:b1969.
PATRICi 32119269. VBIEscCol129921_2049.

Organism-specific databases

EchoBASEi EB3798.
EcoGenei EG14045. yedW.

Phylogenomic databases

eggNOGi COG0745.
HOGENOMi HOG000034815.
KOi K02483.
OMAi MTYDLWH.
OrthoDBi EOG6G4VQG.
PhylomeDBi P76340.

Enzyme and pathway databases

BioCyci EcoCyc:G7057-MONOMER.
ECOL316407:JW5322-MONOMER.

Miscellaneous databases

PROi P76340.

Gene expression databases

Genevestigatori P76340.

Family and domain databases

Gene3Di 1.10.10.10. 1 hit.
InterProi IPR011006. CheY-like_superfamily.
IPR001867. Sig_transdc_resp-reg_C.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR006291. Sig_transdc_resp-reg_metal.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view ]
Pfami PF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view ]
SMARTi SM00448. REC. 1 hit.
SM00862. Trans_reg_C. 1 hit.
[Graphical view ]
SUPFAMi SSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
TIGRFAMsi TIGR01387. cztR_silR_copR. 1 hit.
PROSITEi PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publicationsDownload
  1. "A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map."
    Itoh T., Aiba H., Baba T., Fujita K., Hayashi K., Inada T., Isono K., Kasai H., Kimura S., Kitakawa M., Kitagawa M., Makino K., Miki T., Mizobuchi K., Mori H., Mori T., Motomura K., Nakade S.
    , Nakamura Y., Nashimoto H., Nishio Y., Oshima T., Saito N., Sampei G., Seki Y., Sivasundaram S., Tagami H., Takeda J., Takemoto K., Wada C., Yamamoto Y., Horiuchi T.
    DNA Res. 3:379-392(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. "The complete genome sequence of Escherichia coli K-12."
    Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
    Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli."
    Yamamoto K., Hirao K., Oshima T., Aiba H., Utsumi R., Ishihama A.
    J. Biol. Chem. 280:1448-1456(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: PHOSPHORYLATION.
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry nameiYEDW_ECOLI
AccessioniPrimary (citable) accession number: P76340
Secondary accession number(s): P97172
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: April 27, 2001
Last modified: May 14, 2014
This is version 113 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

External Data

Dasty 3

Similar proteinsi