Reviewed,
UniProtKB/Swiss-Prot Q10185 (ABC2_SCHPO)
Last modified
November 25, 2008.
Version 68.
History...
Clusters with 100%,
90%,
50% identity |
Documents (2) |
Third-party data |
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Names and origin
| Protein names | Recommended name: ATP-binding cassette transporter abc2 Short name=ABC transporter abc2 EC=3.6.3.44 Alternative name(s): Glutathione S-conjugate-transporting ATPase abc2 ATP-energized glutathione S-conjugate pump abc2 | ||||
| Gene names |
| ||||
| Organism | Schizosaccharomyces pombe (Fission yeast) [Complete proteome] | ||||
| Taxonomic identifier | 4896 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Fungi › Dikarya › Ascomycota › Taphrinomycotina › Schizosaccharomycetes › Schizosaccharomycetales › Schizosaccharomycetaceae › Schizosaccharomyces |
Protein attributes
| Sequence length | 1478 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Involved in detoxification of xenobiotics, and vacuolar sequestration of glutathione S-conjugates. Together with abc4, required for accumulation of a red pigment (ade pigment) in the vacuole of a mutant affected in the adenine biosynthetic pathway. |
| Catalytic activity | ATP + H(2)O + xenobiotic(In) = ADP + phosphate + xenobiotic(Out). |
| Subcellular location | Vacuole membrane; Multi-pass membrane proteinPotential. |
| Miscellaneous | Double disruption mutant, where both abc2 and abc4 are deleted, causes sensitivity to cycloheximide (CHX) and 4-nitroquinoline oxide (4-NQO), and decreased accumulation of monochlorobimane-glutathione (MCIB-GS). |
| Sequence similarities | Belongs to the ABC transporter family. Conjugate transporter (TC 3.A.1.208) subfamily. [View classification] Contains 2 ABC transmembrane type-1 domains. Contains 2 ABC transporter domains. |
Ontologies
Keywords | |
|---|---|
| Biological process | Detoxification Transport |
| Cellular component | Membrane Vacuole |
| Domain | Repeat Transmembrane |
| Ligand | ATP-binding Nucleotide-binding |
| Molecular function | Hydrolase |
| PTM | Glycoprotein Phosphoprotein |
| Technical term | Complete proteome |
Gene Ontology (GO) | |
| Biological process | response to toxin Inferred from electronic annotation. Source: UniProtKB-KW vacuolar transport Ref.2Inferred from mutant phenotype. Source: GeneDB_SPombe |
| Cellular component | Golgi apparatus Inferred from direct assay. Source: GeneDB_SPombe integral to membraneInferred from electronic annotation. Source: InterPro vacuolar membrane Ref.2Inferred from direct assay. Source: GeneDB_SPombe |
| Molecular function | ATP binding Inferred from electronic annotation. Source: InterPro glutathione S-conjugate-exporting ATPase activity Ref.2Inferred from mutant phenotype. Source: GeneDB_SPombe xenobiotic-transporting ATPase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1478 | 1478 | ATP-binding cassette transporter abc2 | PRO_0000093468 | |||||
Regions | |||||||||
| Topological domain | 1 – 25 | 25 | Vacuolar By similarity | ||||||
| Transmembrane | 26 – 46 | 21 | 1 By similarity | ||||||
| Topological domain | 47 – 65 | 19 | Cytoplasmic By similarity | ||||||
| Transmembrane | 66 – 85 | 20 | 2 By similarity | ||||||
| Topological domain | 86 – 90 | 5 | Vacuolar By similarity | ||||||
| Transmembrane | 91 – 104 | 14 | 3 By similarity | ||||||
| Topological domain | 105 – 116 | 12 | Cytoplasmic By similarity | ||||||
| Transmembrane | 117 – 137 | 21 | 4 By similarity | ||||||
| Topological domain | 138 – 154 | 17 | Vacuolar By similarity | ||||||
| Transmembrane | 155 – 175 | 21 | 5 By similarity | ||||||
| Topological domain | 176 – 259 | 84 | Cytoplasmic By similarity | ||||||
| Transmembrane | 260 – 280 | 21 | 6 By similarity | ||||||
| Topological domain | 281 – 310 | 30 | Vacuolar By similarity | ||||||
| Transmembrane | 311 – 331 | 21 | 7 By similarity | ||||||
| Topological domain | 332 – 387 | 56 | Cytoplasmic By similarity | ||||||
| Transmembrane | 388 – 408 | 21 | 8 By similarity | ||||||
| Topological domain | 409 – 411 | 3 | Vacuolar By similarity | ||||||
| Transmembrane | 412 – 432 | 21 | 9 By similarity | ||||||
| Topological domain | 433 – 495 | 63 | Cytoplasmic By similarity | ||||||
| Transmembrane | 496 – 516 | 21 | 10 By similarity | ||||||
| Topological domain | 517 – 539 | 23 | Vacuolar By similarity | ||||||
| Transmembrane | 540 – 560 | 21 | 11 By similarity | ||||||
| Topological domain | 561 – 910 | 350 | Cytoplasmic By similarity | ||||||
| Transmembrane | 911 – 931 | 21 | 12 By similarity | ||||||
| Topological domain | 932 – 968 | 37 | Vacuolar By similarity | ||||||
| Transmembrane | 969 – 990 | 22 | 13 By similarity | ||||||
| Topological domain | 991 – 1033 | 43 | Cytoplasmic By similarity | ||||||
| Transmembrane | 1034 – 1054 | 21 | 14 By similarity | ||||||
| Topological domain | 1055 | 1 | Vacuolar By similarity | ||||||
| Transmembrane | 1056 – 1076 | 21 | 15 By similarity | ||||||
| Topological domain | 1077 – 1147 | 71 | Cytoplasmic By similarity | ||||||
| Transmembrane | 1148 – 1168 | 21 | 16 By similarity | ||||||
| Topological domain | 1169 – 1172 | 4 | Vacuolar By similarity | ||||||
| Transmembrane | 1173 – 1193 | 21 | 17 By similarity | ||||||
| Topological domain | 1194 – 1478 | 285 | Cytoplasmic By similarity | ||||||
| Domain | 268 – 557 | 290 | ABC transmembrane type-1 1 | ||||||
| Domain | 593 – 821 | 229 | ABC transporter 1 | ||||||
| Domain | 918 – 1202 | 285 | ABC transmembrane type-1 2 | ||||||
| Domain | 1239 – 1473 | 235 | ABC transporter 2 | ||||||
| Nucleotide binding | 631 – 638 | 8 | ATP 1 Potential | ||||||
| Nucleotide binding | 1273 – 1280 | 8 | ATP 2 Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 839 | 1 | Phosphoserine | ||||||
| Modified residue | 843 | 1 | Phosphoserine | ||||||
| Modified residue | 863 | 1 | Phosphoserine | ||||||
| Glycosylation | 86 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 139 | 1 | N-linked (GlcNAc...) Potential | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The genome sequence of Schizosaccharomyces pombe." Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A., Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S., Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M. Nurse P.Nature 415:871-880(2002) [PubMed: 11859360] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 38366 / 972. |
| [2] | "A survey of all 11 ABC transporters in fission yeast: two novel ABC transporters are required for red pigment accumulation in a Schizosaccharomyces pombe adenine biosynthetic mutant." Iwaki T., Giga-Hama Y., Takegawa K. Microbiology 152:2309-2321(2006) [PubMed: 16849797] [Abstract] Cited for: FUNCTION, SUBCELLULAR LOCATION, DISRUPTION MUTANT. |
| [3] | "Phosphoproteome analysis of fission yeast." Wilson-Grady J.T., Villen J., Gygi S.P. J. Proteome Res. 7:1088-1097(2008) [PubMed: 18257517] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-839; SER-843 AND SER-863, MASS SPECTROMETRY. |
Cross-references
Sequence databases | |
|---|---|
| CU329670 Genomic DNA. Translation: CAA93309.1. | |
| PIR | T38712. |
| RefSeq | NP_593943.2. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1MT0 based on UniProtKB P08716. |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 2543193. |
| KEGG | spo:SPAC3F10.11c. |
| NMPDR | fig|4896.1.peg.3913. |
Organism-specific databases | |
| GeneDB_Spombe | SPAC3F10.11c. |
Enzyme and pathway databases | |
| BioCyc | SPOM-XXX-01:SPOM-XXX-01-001584-MON. |
Gene expression databases | |
| ArrayExpress | Q10185. |
Family and domain databases | |
| InterPro | IPR003593. AAA+_ATPase_core. IPR011527. ABC_TM_1. IPR001140. ABC_TM_transpt. IPR003439. ABC_transporter-like. [Graphical view] |
| Pfam | PF00664. ABC_membrane. 2 hits. PF00005. ABC_tran. 2 hits. [Graphical view] |
| ProDom | PD000006. ABC_transporter. 2 hits. [Graphical view] [Entries sharing at least one domain] |
| SMART | SM00382. AAA. 2 hits. [Graphical view] |
| PROSITE | PS50929. ABC_TM1F. 2 hits. PS00211. ABC_TRANSPORTER_1. 1 hit. PS50893. ABC_TRANSPORTER_2. 2 hits. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | ABC2_SCHPO | ||||||||
| Accession | Primary (citable) accession number: Q10185 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | FPAP (Fungal Proteome Annotation Project) | ||||||||
Relevant documents
| Schizosaccharomyces pombe Schizosaccharomyces pombe: entries and gene names |
| SIMILARITY comments Index of protein domains and families |

Clusters with


