Reviewed, UniProtKB/Swiss-Prot Q1ZXF0 (RA51D_DICDI)

Names and origin

Protein names

Recommended name:
    Probable DNA repair protein RAD51 homolog 4

Gene names

Name:	rad51d
ORF Names:	DDB_0232317

Organism

Dictyostelium discoideum (Slime mold) [Complete proteome]

Taxonomic identifier

44689 [NCBI]

Taxonomic lineage

Eukaryota › Mycetozoa › Dictyosteliida › Dictyostelium

Protein attributes

Sequence length	354 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents By similarity.
Subcellular location	NucleusBy similarity.
Sequence similarities	Belongs to the recA family. RAD51 subfamily.

Ontologies

Keywords
Biological process	DNA damage DNA recombination DNA repair
Cellular component	Nucleus
Ligand	ATP-binding DNA-binding Nucleotide-binding
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view
Molecule processing
	Chain	1 – 354	354	Probable DNA repair protein RAD51 homolog 4
Regions
	Nucleotide binding	115 – 122	8	ATP Potential

Sequences

	Sequence		Length	Mass (Da)
	Q1ZXF0-1 [UniParc]. Last modified May 2, 2006. Version 1. Checksum: AF2143B0A140AE6A	FASTA	354	40,822
	10 20 30 40 50 60 MEEESISGLE VRFYQTQCLS EDNVIKFENN GYPMIDLILF SDAYQIQRNT SIPIETVTLI 70 80 90 100 110 120 QRNLQRLFSS VPINGYQHYL DVKEFKTHYS SGIKLLDQLL GGNGFTSGEI YELVGNTSCG 130 140 150 160 170 180 KTQISMCCSL NLSQQYNSNI IYIDSSNSFS PPRLIEIFKS NYLIKQRQKQ QQKQQQKQHQ 190 200 210 220 230 240 KQQENNDKIE QDKILKILDR IKVFNCFDSI TLLELLSTID STLSIISDEI PTFENQFYKG 250 260 270 280 290 300 LKMVVIDSIG TLLAPIIGGK QTQGHYTMMM ISRLIKYIAD TYQIIFLITN NTVGGNSFDN 310 320 330 340 350 KAALGEAWSM VPNHQLMINH QYNDDENEER SIYIEKSTRL PVSIIFIINL YWLF

References

[1]

"The genome of the social amoeba Dictyostelium discoideum." Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N. , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A. Nature 435:43-57(2005) [PubMed: 15875012] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AX4.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AAFI02000077 Genomic DNA. Translation: EAS66855.1.
RefSeq	XP_001134538.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	4238157.
KEGG	ddi:DDB_0232317.
Organism-specific databases
dictyBase	DDB0232317. rad51d.
Family and domain databases
InterPro	IPR001553. RecA_bac. [Graphical view]
PROSITE	PS50162. RECA_2. 1 hit. [Graphical view]
ProDom	Q1ZXF0. [Graphical view] [Entries sharing at least one domain]
BLOCKS	Search...
Other Resources
ProtoNet	Search...

Entry information

Entry name

RA51D_DICDI

Accession

Primary (citable) accession number: Q1ZXF0

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 8, 2008
Last sequence update:	May 2, 2006
Last modified:	July 22, 2008
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)