Unreviewed, UniProtKB/TrEMBL Q1ZXK9 (Q1ZXK9_DICDI)

Names and origin

Protein names

Submitted name:
    Rab GTPase EMBL EAS66917.1

Gene names

ORF Names:

DDB_0233191 EMBL EAS66917.1

Organism

Dictyostelium discoideum (Slime mold) [Complete proteome]

Taxonomic identifier

44689 [NCBI]

Taxonomic lineage

Eukaryota › Mycetozoa › Dictyosteliida › Dictyostelium

Protein attributes

Sequence length	212 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities	Belongs to the small GTPase superfamily. Rab family. RuleBase RU003315V0
Caution	The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Ligand	GTP-binding RuleBase RU003312V0 Spearmint SPM003579 Nucleotide-binding
PTM	Lipoprotein RuleBase RU003611V0
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein transport Inferred from electronic annotation. Source: InterPro small GTPase mediated signal transduction Inferred from electronic annotation. Source: InterPro
Molecular function	GTP binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q1ZXK9-1 [UniParc]. Last modified May 2, 2006. Version 1. Checksum: 569BAA880DB2088F	FASTA	212	24,493
	10 20 30 40 50 60 MSYQQSKDQQ QPQQQQKYLI PVKCVLIGPT FSGKTSLVVR LVRETFSKES QPTVGAMFLN 70 80 90 100 110 120 KTFQFSTHFI KLEVWDTAGQ EKFNSLAPMY FKKSKVAIIV FDLSDRQSFV KAKMWNNEFK 130 140 150 160 170 180 THATEPAIMI LIGNKCDLNK TVLQSDIDDF IREEKENSID FTYFEASAKE NTNVNNIFET 190 200 210 IAGKIPWKEE IRERTEALQV SPVINKKKKC CK

References

[1]

"The genome of the social amoeba Dictyostelium discoideum." Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N. , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A. Nature 435:43-57(2005) [PubMed: 15875012] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AX4.

[2]

"Sequence and analysis of chromosome 2 of Dictyostelium discoideum." Gloeckner G., Eichinger L., Szafranski K., Pachebat J.A., Bankier A.T., Dear P.H., Lehmann R., Baumgart C., Parra G., Abril J.F., Guigo R., Kumpf K., Tunggal B., Cox E.C., Quail M.A., Platzer M., Rosenthal A., Noegel A.A. Nature 418:79-85(2002) [PubMed: 12097910] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AX4.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AAFI02000013 Genomic DNA. Translation: EAS66917.1.
RefSeq	XP_001134601.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	4238083.
KEGG	ddi:DDB_0233191.
Organism-specific databases
dictyBase	DDB0233191. geneDDB0233191.
Family and domain databases
InterPro	IPR003579. GTPase_Rab. IPR015599. Rab5_like. IPR013753. Ras. IPR001806. Ras_trnsfrmng. IPR005225. Small_GTP_bd. [Graphical view]
PANTHER	PTHR11708:SF254. Rab5_like. 1 hit.
Pfam	PF00071. Ras. 1 hit. [Graphical view]
PRINTS	PR00449. RASTRNSFRMNG.
SMART	SM00175. RAB. 1 hit. [Graphical view]
TIGRFAMs	TIGR00231. small_GTP. 1 hit.
ProDom	Q1ZXK9. [Graphical view] [Entries sharing at least one domain]

Entry information

Entry name

Q1ZXK9_DICDI

Accession

Primary (citable) accession number: Q1ZXK9

Entry history

Integrated into UniProtKB/TrEMBL:	May 2, 2006
Last sequence update:	May 2, 2006
Last modified:	July 22, 2008
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)