Reviewed, UniProtKB/Swiss-Prot Q4UN64 (RS6_RICFE)

Names and origin

Protein names

Recommended name:
    30S ribosomal protein S6

Gene names

Name:	rpsF
Ordered Locus Names:	RF_0143

Organism

Rickettsia felis (Rickettsia azadi) [Complete proteome] [HAMAP]

Taxonomic identifier

42862 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group

Protein attributes

Sequence length	121 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Binds together with S18 to 16S ribosomal RNA By similarity.
Sequence similarities	Belongs to the ribosomal protein S6P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: InterPro
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 121	121	30S ribosomal protein S6 HAMAP MF_00360		PRO_0000229573

Sequences

	Sequence		Length	Mass (Da)
	Q4UN64-1 [UniParc]. Last modified April 4, 2006. Version 2. Checksum: 9D43EB913AFF93B0	FASTA	121	13,946
	10 20 30 40 50 60 MSFYESVFII RQDVSLNDID KIVDDFAKII KDNNGTIVKK EYWGLRTLAY KIGNNKKGHY 70 80 90 100 110 120 YFLGLDITGN VKEELERKMK LNENIIRFLT IKADSISSEP SQILKNQSTE NTPVIDVTIN N

References

[1]

"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite." Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D. PLoS Biol. 3:1-12(2005) [PubMed: 15984913] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000053 Genomic DNA. Translation: AAY60994.1. Different initiation.
RefSeq	YP_246159.2.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	3400644.
GenomeReviews	Gene locus RF_0143 in contig CP000053_GR.
KEGG	rfe:RF_0143.
NMPDR	fig|315456.3.peg.662.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q4UN64.
Enzyme and pathway databases
BioCyc	RFEL315456:RF_0143-MON.
Family and domain databases
HAMAP	MF_00360. [Tree]
InterPro	IPR000529. Ribosomal_S6. IPR014717. Transl_elong_EF1B/ribosomal_S6. [Graphical view]
Gene3D	G3DSA:3.30.70.60. Transl_elong_EF1B/rib_con. 1 hit.
Pfam	PF01250. Ribosomal_S6. 1 hit. [Graphical view]
ProDom	PD003809. Ribosomal_S6. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00166. S6. 1 hit.
PROSITE	PS01048. RIBOSOMAL_S6. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RS6_RICFE

Accession

Primary (citable) accession number: Q4UN64

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 4, 2006
Last sequence update:	April 4, 2006
Last modified:	November 25, 2008
This is version 22 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)