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Reviewed, UniProtKB/Swiss-Prot Q4UND8 (RS2_RICFE)

Last modified November 25, 2008. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    30S ribosomal protein S2
Gene names
Name: rpsB
Ordered Locus Names: RF_0069
OrganismRickettsia felis (Rickettsia azadi) [Complete proteome] [HAMAP]
Taxonomic identifier42862 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length295 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family.

Ontologies

Keywords

   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome

Gene Ontology (GO)

   Biological processtranslation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentsmall ribosomal subunit

Inferred from electronic annotation. Source: InterPro

   Molecular functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 29529530S ribosomal protein S2 HAMAP MF_00291
PRO_0000278018

Sequences

Sequence LengthMass (Da)Tools
Q4UND8-1 [UniParc].

Last modified July 5, 2005. Version 1.
Checksum: 7992B5A66B1D5E29

FASTA29532,952
        10         20         30         40         50         60 
MSKIPSVNIK ELLDAGVHFG HKTSRWNPKM ASYIYGERDD VHIIDLRQSA ALMSVALNTI 

        70         80         90        100        110        120 
YETVKKDGKI LFVSTKIQAS DIIAEYAEKC GQYYVNHRWL GGMLTNWKTI AGSIEKLNKL 

       130        140        150        160        170        180 
EKTLENEEAL MGYTKKEILD MSRKKEKLLL SLAGIRNLNS KPDLLVVIDT NKEHIAINEA 

       190        200        210        220        230        240 
VKLNVPIVAV VDTNSNPDNV NYPIPGNDDS IRSIRLYCSL FADAALQGLE ESMKASGVDM 

       250        260        270        280        290 
GAMQEHTDKA LTSKNVSKLK QAKKFSKTKN IDEETNTEFE QALNDADENK NSDNA 

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References

[1]"The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite."
Ogata H., Renesto P., Audic S., Robert C., Blanc G., Fournier P.-E., Parinello H., Claverie J.-M., Raoult D.
PLoS Biol. 3:1-12(2005) [PubMed: 15984913] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-1525 / URRWXCal2.

Cross-references

Sequence databases

CP000053 Genomic DNA. Translation: AAY60920.1.
RefSeqYP_246085.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3400299.
GenomeReviewsGene locus RF_0069 in contig CP000053_GR.
KEGGrfe:RF_0069.
NMPDRfig|315456.3.peg.551.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ4UND8.

Enzyme and pathway databases

BioCycRFEL315456:RF_0069-MON.

Family and domain databases

HAMAPMF_00291.
[Tree]
InterProIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac-type.
[Graphical view]
PANTHERPTHR12534. Ribosom_S2_bac. 1 hit.
PfamPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSPR00395. RIBOSOMALS2.
TIGRFAMsTIGR01011. rpsB_bact. 1 hit.
PROSITEPS00962. RIBOSOMAL_S2_1. 1 hit.
PS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS2_RICFE
AccessionPrimary (citable) accession number: Q4UND8
Entry history
Integrated into UniProtKB/Swiss-Prot: February 20, 2007
Last sequence update: July 5, 2005
Last modified: November 25, 2008
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

Rickettsia felis (Rickettsia azadi)

Rickettsia felis (strain URRWXCal2): entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents