Unreviewed, UniProtKB/TrEMBL Q55088 (Q55088_SULSO)

Names and origin

Protein names	Submitted name:     Alpha-amylase EMBL BAA11010.1
Organism	Sulfolobus solfataricus EMBL BAA11010.1
Taxonomic identifier	2287 [NCBI]
Taxonomic lineage	Archaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Sulfolobus

Protein attributes

Sequence length	559 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Gene Ontology (GO)
Biological process	trehalose biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q55088-1 [UniParc]. Last modified May 1, 1997. Version 2. Checksum: 79FBE23A7CD38B4E	FASTA	559	64,790
	10 20 30 40 50 60 MTFAYKIDGN EVIFTLWAPY QKSVKLKVLE KGLYEMERDE KGYFTITLNN VKVRDRYKYV 70 80 90 100 110 120 LDDASEIPDP ASRYQPEGVH GPSQIIQESK EFNNETFLKK EDLIIYEIHV GTFTPEGTFE 130 140 150 160 170 180 GVIRKLDYLK DLGITAIEIM PIAQFPGKRD WGYDGVYLYA VQNSYGGPEG FRKLVDEAHK 190 200 210 220 230 240 KGLGVILDVV YNHVGPEGNY MVKLGPYFSQ KYKTPWGLTF NFDDAESDEV RKFILENVEY 250 260 270 280 290 300 WIKEYNVDGF RLDAVHAIID TSPKHILEEI ADVVHKYNRI VIAESDLNDP RVVNPKEKCG 310 320 330 340 350 360 YNIDAQWVDD FHHSIHAYLT GERQGYYTDF GNLDDIVKSY KDVFVYDGKY SNFRRKTHGE 370 380 390 400 410 420 PVGELDGCNF VVYIQNHDQV GNRGKGERII KLVDRESYKI AAALYLLSPY IPMIFMGEEY 430 440 450 460 470 480 GEENPFYFFS DFSDSKLIQG VREGRKKENG QDTDPQDEST FNASKLSWKI DEEIFSFYKI 490 500 510 520 530 540 LIKMRKELSI ACDRRVNVVN GENWLIIKGR EYFSLYVFSK SSIEVKYSGT LLLSSNNSFP 550 QHIEEGKYEF DKGFALYKL

References

[1]	"The gene analysis of the new amylases from the hyper thermophilic archae Sulfolobus." Kato M., Kettoku M., Miura Y., Komeda T., Konishi Y., Shindo K., Kobayashi K., Iwamatsu A. Submitted (SEP-1995) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: KM1 EMBL BAA11010.1.
[2]	"Gene cloning and expression of new trehalose-producing enzymes from the hyperthermophilic archaeum Sulfolobus solfataricus KM1." Kobayashi K., Kato M., Miura Y., Kettoku M., Komeda T., Iwamatsu A. Biosci. Biotechnol. Biochem. 60:1882-1885(1996) [PubMed: 8987868] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Crystal structure of glycosyltrehalose trehalohydrolase from the hyperthermophilic archaeum Sulfolobus solfataricus." Feese M.D., Kato Y., Tamada T., Kato M., Komeda T., Miura Y., Hirose M., Hondo K., Kobayashi K., Kuroki R. J. Mol. Biol. 301:451-464(2000) [PubMed: 10926520] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF 2-559.

Cross-references

Sequence databases

EMBLGenBankDDBJ

D64130 Genomic DNA. Translation: BAA11010.1.

PIR

JC5135.

3D structure databases

PDBMSD

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1EH9	X-ray	3.00	A	2-559	[»]
1EHA	X-ray	3.00	A	2-559	[»]

ModBase

Search...

Family and domain databases

InterPro

IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_sub_cat.
IPR013783. Ig-like_fold.
IPR015156. MTHase.
IPR012768. Trehalose_TreZ.
[Graphical view]

Gene3D

G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.

Pfam

PF09071. Alpha-amyl_C. 1 hit.
PF00128. Alpha-amylase. 2 hits.
PF02922. Isoamylase_N. 1 hit.
[Graphical view]

PIRSF

PIRSF006337. Trehalose_TreZ. 1 hit.

TIGRFAMs

TIGR02402. trehalose_TreZ. 1 hit.

Entry information

Entry name

Q55088_SULSO

Accession

Primary (citable) accession number: Q55088

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	May 1, 1997
Last modified:	July 22, 2008
This is version 44 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)