Reviewed,
UniProtKB/Swiss-Prot Q59006 (AMYA_METJA)
Last modified
November 25, 2008.
Version 43.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Putative alpha-amylase EC=3.2.1.1 | ||
| Gene names |
| ||
| Organism | Methanocaldococcus jannaschii (Methanococcus jannaschii) [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 2190 [NCBI] | ||
| Taxonomic lineage | Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus |
Protein attributes
| Sequence length | 467 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Catalytic activity | Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in oligosaccharides and polysaccharides. |
| Sequence similarities | Belongs to the glycosyl hydrolase 57 family. |
Ontologies
Keywords | |
|---|---|
| Biological process | Carbohydrate metabolism |
| Molecular function | Glycosidase Hydrolase |
| Technical term | Complete proteome |
Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Molecular function | alpha-amylase activity Inferred from electronic annotation. Source: EC hydrolase activity, acting on carbon-nitrogen (but not peptide) bondsInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| [1] | "Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G.  Venter J.C.Science 273:1058-1073(1996) [PubMed: 8688087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440. |
Cross-references
Sequence databases | |
|---|---|
| L77117 Genomic DNA. Translation: AAB99631.1. | |
| PIR | B64501. |
| RefSeq | NP_248621.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 1452520. |
| GenomeReviews | Gene locus MJ1611 in contig L77117_GR. |
| KEGG | mja:MJ1611. |
| NMPDR | fig|243232.1.peg.1658. |
| TIGR | MJ1611. |
Phylogenomic databases | |
| HOGENOM | Q59006. |
Enzyme and pathway databases | |
| BioCyc | MJAN243232:MJ_1611-MON. |
Family and domain databases | |
| InterPro | IPR004300. Glyco_hydro_57_core. IPR002509. Polysac_deacetylase. [Graphical view] |
| Gene3D | G3DSA:3.20.20.370. Polysac_deacetylase. 1 hit. |
| Pfam | PF03065. Glyco_hydro_57. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | AMYA_METJA | ||||||||
| Accession | Primary (citable) accession number: Q59006 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||
Relevant documents
| Glycosyl hydrolases Classification of glycosyl hydrolase families and list of entries |
| Methanococcus jannaschii Methanococcus jannaschii: entries and gene names |
| SIMILARITY comments Index of protein domains and families |
