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Reviewed, UniProtKB/Swiss-Prot Q5AI22 (ATG21_CANAL)

Last modified November 4, 2008. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Autophagy-related protein 21
Gene names
Name: ATG21
ORF Names: CaO19.3030, CaO19.10548
OrganismCandida albicans (Yeast)
Taxonomic identifier5476 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesmitosporic SaccharomycetalesCandida

Protein attributes

Sequence length529 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Required for cytoplasm to vacuole transport (Cvt) vesicles formation and autophagy By similarity.

Subcellular location

CytoplasmBy similarity. Membrane; Peripheral membrane proteinBy similarity. Vacuole membrane; Peripheral membrane proteinBy similarity. Note= Vacuolar and perivacuolar punctate structures By similarity.

Sequence similarities

Belongs to the WD repeat SVP1 family.

Contains 2 WD repeats.

Ontologies

Keywords

   Biological processAutophagy
Protein transport
Transport
   Cellular componentCytoplasm
Membrane
Vacuole
   DomainRepeat
WD repeat

Gene Ontology (GO)

   Biological processautophagy

Inferred from electronic annotation. Source: UniProtKB-KW

protein transport

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentvacuolar membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 529529Autophagy-related protein 21
PRO_0000050876

Regions

Repeat271 – 31141WD 1
Repeat321 – 36141WD 2

Sequences

Sequence LengthMass (Da)Tools
Q5AI22-1 [UniParc].

Last modified April 26, 2005. Version 1.
Checksum: A31F3C9C491028EB

FASTA52960,019
        10         20         30         40         50         60 
MVTINDLSFN PDYSSISVST SDGFKIFNCE PFGEFYSSQE SPLRKSISNS LEDSAGCQNP 

        70         80         90        100        110        120 
THSKTDSQDT PARFPTAFLK MLFSTSLTIV VPQTQDNLGN RLLKIYNLKQ NLKICELNFP 

       130        140        150        160        170        180 
SSIIDIKLNR KRLLVVLDTG QLYIYDLSCV RLLKILQLSF NEHDGDQKFI GDLSADDSSW 

       190        200        210        220        230        240 
LIIPVQSTNN QTDLLNAETG SQPSTPKLTP SDSVINTGSY SQYLEFTRNS SLSNLKKKNK 

       250        260        270        280        290        300 
LITLEDIKND SEGWVVVYDT INLAPVVIFE AHHSTIARIC ISHRDNKVAT ASIKGTIIRI 

       310        320        330        340        350        360 
FDLKEFEGKV KVHKVKNLRR GHNLVKVNSL SFHNDNHILG CGSESNTIHL FKIHEEESDI 

       370        380        390        400        410        420 
CTNENSEDRT NHNSDYEDSD GDTSKSSEDL NENLANLLIS KPLDPVPMET EDKLSSSWFV 

       430        440        450        460        470        480 
KTKKLINNQY TSSIIKKLPY KDYFENLIWE PPQRSFAYIK LPEYAPHNEK DPRSNKVEIG 

       490        500        510        520 
FNNDLVFIAS YHTGNFYQYQ IPKQRGPVSS INEDDKREEC SLISQFNLI 

« Hide

References

[1]"The diploid genome sequence of Candida albicans."
Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B., Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W., Scherer S.
Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004) [PubMed: 15123810] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SC5314.

Cross-references

Sequence databases

AACQ01000015 Genomic DNA. Translation: EAL02730.1.
AACQ01000017 Genomic DNA. Translation: EAL02450.1.
RefSeqXP_721257.1.
XP_721528.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3636859.
3637123.
KEGGcal:CaO19.10548.
cal:CaO19.3030.

Organism-specific databases

CGDCAL0001380. orf19.3030.

Family and domain databases

InterProIPR015943. WD40/YVTN_repeat-like.
IPR001680. WD40_repeat.
[Graphical view]
Gene3DG3DSA:2.130.10.10. WD40/YVTN_repeat-like. 1 hit.
PfamPF00400. WD40. 1 hit.
[Graphical view]
SMARTSM00320. WD40. 2 hits.
[Graphical view]
PROSITEPS00678. WD_REPEATS_1. False negative.
PS50082. WD_REPEATS_2. False negative.
PS50294. WD_REPEATS_REGION. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameATG21_CANAL
AccessionPrimary (citable) accession number: Q5AI22
Entry history
Integrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: April 26, 2005
Last modified: November 4, 2008
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectFPAP (Fungal Proteome Annotation Project)

Relevant documents

Candida albicans

Candida albicans: entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents