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Reviewed, UniProtKB/Swiss-Prot Q5SMY5 (GRXS2_ORYSJ)

Last modified July 22, 2008. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Monothiol glutaredoxin-S2
Gene names
Name: GRXS2
Ordered Locus Names: Os01g0194600, LOC_Os01g09830
ORF Names: P0001B06.21, P0498B01.7
OrganismOryza sativa subsp. japonica (Rice)
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length125 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Function

May only reduce GSH-thiol disulfides, but not protein disulfides Potential.

Subcellular location

CytoplasmBy similarity.

Sequence similarities

Belongs to the glutaredoxin family. Monothiol subfamily.

Contains 1 glutaredoxin domain.

Ontologies

Keywords

   Biological processElectron transport
Transport
   Cellular componentCytoplasm
   DomainRedox-active center

Gene Ontology (GO)

None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical view

Molecule processing

Chain1 – 125125Monothiol glutaredoxin-S2

Regions

Domain28 – 12497Glutaredoxin

Sequences

Sequence LengthMass (Da)Tools
Q5SMY5-1 [UniParc].

Last modified December 21, 2004. Version 1.
Checksum: 534CB55E9001EBCA

FASTA12512,799
        10         20         30         40         50         60 
MQAVAAAAGM MRRGSLTIDP AGEEEAPAER VGRLVRESPV VVFARRGCYM AHVMRRLLAA 

        70         80         90        100        110        120 
VGAHATVIEL EGGAAEEEEA ALGGGAALPA LFVGGDPVGG LEGLMGLHLS GRLVPRLREV 


GALCT 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence and structure of rice chromosome 1."
Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M. expand/collapse author list , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
Nature 420:312-316(2002) [PubMed: 12447438] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed: 16100779] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana."
The rice annotation project (RAP)
Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed: 12869764] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.
[5]"Genome-wide analysis of plant glutaredoxin systems."
Rouhier N., Couturier J., Jacquot J.-P.
J. Exp. Bot. 57:1685-1696(2006) [PubMed: 16720602] [Abstract]
Cited for: GENE FAMILY.

Cross-references

Sequence databases

AP002537 Genomic DNA. Translation: BAD72201.1.
AP003417 Genomic DNA. Translation: BAD72420.1.
AP008207 Genomic DNA. Translation: BAF04201.1.
AK102031 mRNA. No translation available.
RefSeqNP_001042287.1.
UniGeneOs.11166

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4327316.
KEGGosa:4327316.

Organism-specific databases

GrameneQ5SMY5.

Family and domain databases

InterProIPR011905. GlrX_like_pln_2.
IPR002109. Glutaredoxin.
IPR014025. Glutaredoxin_sub.
IPR012335. Thioredoxin_fold.
[Graphical view]
Gene3DG3DSA:3.40.30.10. Thioredoxin_fold. 1 hit.
PfamPF00462. Glutaredoxin. 1 hit.
[Graphical view]
PRINTSPR00160. GLUTAREDOXIN.
TIGRFAMsTIGR02189. GlrX-like_plant. 1 hit.
PROSITEPS51354. GLUTAREDOXIN_2. 1 hit.
[Graphical view]
ProDomQ5SMY5.
[Graphical view] [Entries sharing at least one domain]
BLOCKSSearch...

Other Resources

ProtoNetSearch...

Entry information

Entry nameGRXS2_ORYSJ
AccessionPrimary (citable) accession number: Q5SMY5
Entry history
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: December 21, 2004
Last modified: July 22, 2008
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

Relevant documents

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents