Reviewed, UniProtKB/Swiss-Prot Q60386 (Y080_METJA)

Names and origin

Protein names

Recommended name:
    Uncharacterized transcriptional regulator MJ0080

Gene names

Ordered Locus Names:

MJ0080

Organism

Methanocaldococcus jannaschii (Methanococcus jannaschii) [Complete proteome] [HAMAP]

Taxonomic identifier

2190 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus

Protein attributes

Sequence length	127 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the transcriptional regulatory copG/nikR family.

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Ligand	DNA-binding
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view
Molecule processing
	Chain	1 – 127	127	Uncharacterized transcriptional regulator MJ0080

Sequences

	Sequence		Length	Mass (Da)
	Q60386-1 [UniParc]. Last modified November 1, 1997. Version 1. Checksum: BB57018575CF9AE4	FASTA	127	14,892
	10 20 30 40 50 60 MERISLTIEK NLLKEVDEII NKERISRSEF IRRALEYYVK KYDWLSRIES KIGEITVIYN 70 80 90 100 110 120 SKAVEDIVKL ESQYKDIVII SLEIPFEGKI IRMIAIKGQR DRIIEFTNKL KGISSVELAQ LTTISIE

References

[1]

"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G. , Merrick J.M., Glodek A., Scott J.L., Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R., Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D., Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Science 273:1058-1073(1996) [PubMed: 8688087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

Cross-references

Sequence databases
EMBLGenBankDDBJ	L77117 Genomic DNA. Translation: AAB98060.1.
PIR	H64309.
RefSeq	NP_247044.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1450919.
GenomeReviews	Gene locus MJ0080 in contig L77117_GR.
KEGG	mja:MJ0080.
NMPDR	fig|243232.1.peg.81.
TIGR	MJ0080.
Phylogenomic databases
HOGENOM	Q60386.
Enzyme and pathway databases
BioCyc	MJAN243232:MJ_0080-MON.
Family and domain databases
InterPro	IPR002145. CopG_DNA_bd. [Graphical view]
Pfam	PF01402. RHH_1. 1 hit. [Graphical view]
ProDom	Q60386. [Graphical view] [Entries sharing at least one domain]
BLOCKS	Search...
Other Resources
ProtoNet	Search...

Entry information

Entry name

Y080_METJA

Accession

Primary (citable) accession number: Q60386

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	July 22, 2008
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)