Reviewed,
UniProtKB/Swiss-Prot Q6S5H4 (A26B1_HUMAN)
Last modified
July 22, 2008.
Version 36.
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: ANKRD26-like family B member 1 Alternative name(s): Prostate, ovary, testis-expressed protein on chromosome 15 Short name=POTE-15 | ||||
| Gene names |
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| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 581 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Sequence similarities | Belongs to the POTE family. Contains 7 ANK repeats. |
Ontologies
Keywords | |
|---|---|
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | ANK repeat Coiled coil Repeat |
Gene Ontology (GO) | |
| None. [Check GOA] | |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | |||||
| Isoform 1 (identifier: Q6S5H4-1) Also known as: POTE15A; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | |||||
| Isoform 2 (identifier: Q6S5H4-2) Also known as: POTE15B; The sequence of this isoform differs from the canonical sequence as follows: 52-88: Missing. | |||||
| Isoform 3 (identifier: Q6S5H4-3) The sequence of this isoform differs from the canonical sequence as follows: 376-381: EQDLKL → GKEAEE 382-581: Missing. | |||||
| Notes: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | ||||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 581 | 581 | ANKRD26-like family B member 1 | |||||
Regions | ||||||||
| Repeat | 138 – 171 | 34 | ANK 1 | |||||
| Repeat | 172 – 201 | 30 | ANK 2 | |||||
| Repeat | 205 – 234 | 30 | ANK 3 | |||||
| Repeat | 238 – 267 | 30 | ANK 4 | |||||
| Repeat | 271 – 300 | 30 | ANK 5 | |||||
| Repeat | 304 – 333 | 30 | ANK 6 | |||||
| Repeat | 337 – 373 | 37 | ANK 7 | |||||
| Coiled coil | 489 – 577 | 89 | Potential | |||||
Natural variations | ||||||||
| Alternative sequence | 52 – 88 | 37 | Missing in isoform 2. | |||||
| Alternative sequence | 376 – 381 | 6 | EQDLKL → GKEAEE in isoform 3. | |||||
| Alternative sequence | 382 – 581 | 200 | Missing in isoform 3. | |||||
| Natural variant | 30 | 1 | H → D: dbSNP rs4503752. | |||||
| Natural variant | 43 | 1 | M → V: dbSNP rs2605913. | |||||
| Natural variant | 64 | 1 | C → W: dbSNP rs2458860. | |||||
| Natural variant | 68 | 1 | C → R: dbSNP rs6599743. | |||||
| Natural variant | 77 | 1 | T → K: dbSNP rs4429251. | |||||
| Natural variant | 88 | 1 | N → D: dbSNP rs2458862. | |||||
| Natural variant | 286 | 1 | Q → E: dbSNP rs2445603. | |||||
| Natural variant | 511 | 1 | K → E: dbSNP rs1949282. | |||||
| Natural variant | 535 | 1 | M → K: dbSNP rs1828869. | |||||
| Natural variant | 568 | 1 | A → V: dbSNP rs1828868. | |||||
Experimental info | ||||||||
| Sequence conflict | 203 | 1 | D → G in AAH66981. Ref.2 | |||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Five POTE paralogs and their splice variants are expressed in human prostate and encode proteins of different lengths." Bera T.K., Huynh N., Maeda H., Sathyanarayana B.K., Lee B., Pastan I. Gene 337:45-53(2004) [PubMed: 15276201] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2), VARIANTS ASP-30 AND VAL-43. Tissue: Prostate. |
| [2] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 3), VARIANT GLU-286. Tissue: Testis. |
Cross-references
Sequence databases | |
|---|---|
| AY465170 mRNA. Translation: AAS58869.1. AY465173 mRNA. Translation: AAS58872.1. BC066981 mRNA. Translation: AAH66981.1. | |
| RefSeq | NP_997238.2. |
| UniGene | Hs.558766 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1K1B based on UniProtKB P20749. |
| ModBase | Search... |
Genome annotation databases | |
| Ensembl | ENSG00000183206. Homo sapiens. [Contig view] |
| GeneID | 339010. |
| KEGG | hsa:339010. |
Organism-specific databases | |
| H-InvDB | HIX0013605. HIX0019825. HIX0027435. HIX0038118. |
| HGNC | HGNC:33734. A26B1. |
| MIM | 608912. gene. |
| GenAtlas | Search... |
| GeneCards | Search... |
Phylogenomic databases | |
| HOVERGEN | Q6S5H4. |
Gene expression databases | |
| CleanEx | HS_A26B1. |
| GermOnline | ENSG00000183206. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR002110. ANK. [Graphical view] |
| Gene3D | G3DSA:1.25.40.20. ANK. 1 hit. |
| Pfam | PF00023. Ank. 7 hits. [Graphical view] |
| PRINTS | PR01415. ANKYRIN. |
| SMART | SM00248. ANK. 6 hits. [Graphical view] |
| PROSITE | PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 5 hits. [Graphical view] |
| ProDom | Q6S5H4. [Graphical view] [Entries sharing at least one domain] |
| BLOCKS | Search... |
Other Resources | |
| LinkHub | Q6S5H4. |
| SOURCE | Search... |
| ProtoNet | Search... |
Entry information
| Entry name | A26B1_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q6S5H4 Secondary accession number(s): Q6NXN7, Q6S5H7 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| Human chromosome 15 Human chromosome 15: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| UniProtKB secondary accession numbers Index of UniProtKB secondary accession numbers |
| SIMILARITY comments Index of protein domains and families |

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