Reviewed, UniProtKB/Swiss-Prot Q7F830 (CCA11_ORYSJ)

Names and origin

Protein names

Recommended name:
    Cyclin-A1-1
Alternative name(s):
    G2/mitotic-specific cyclin-A1-1
      Short name=CycA1;1

Gene names

Name:	CYCA1-1
Synonyms:	CYCA1
Ordered Locus Names:	Os01g0233500, LOC_Os01g13260
ORF Names:	P0702F03.11

Organism

Oryza sativa subsp. japonica (Rice)

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza

Protein attributes

Sequence length	508 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Function	Involved in the control of the cell cycle at the G2/M (mitosis) transition.
Tissue specificity	Expressed in the dividing region of the root cap and root apex. Expressed in the intercalary meristem of internodes and in adventitious roots under submergence conditions.
Developmental stage	Expressed in the G2/M phases and disappears at the metaphase of mitosis.
Induction	By gibberellin (GA3) and submergence.
Sequence similarities	Belongs to the cyclin family. Cyclin AB subfamily.

Ontologies

Keywords
Biological process	Cell cycle Cell division Mitosis
Molecular function	Cyclin
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view
Molecule processing
	Chain	1 – 508	508	Cyclin-A1-1

Sequences

	Sequence		Length	Mass (Da)
	Q7F830-1 [UniParc]. Last modified July 5, 2004. Version 1. Checksum: E750D07E5574B210	FASTA	508	55,035
	10 20 30 40 50 60 MSSNLAASRR SSSSSSVAAA AAAKRPAVGE GGGGGGGKAA AGAAAAKKRV ALSNISNVAA 70 80 90 100 110 120 GGGAPGKAGN AKLNLAASAA PVKKGSLASG RNVGTNRASA VKSASAKPAP AISRHESATQ 130 140 150 160 170 180 KESVLPPKVP SIVPTAALAP VTVPCSSFVS PMHSGDSVSV DETMSTCDSM KSPEFEYIDN 190 200 210 220 230 240 GDSSSVLGSL QRRANENLRI SEDRDVEETK WKKDAPSPME IDQICDVDNN YEDPQLCATL 250 260 270 280 290 300 ASDIYMHLRE AETRKRPSTD FMETIQKDVN PSMRAILIDW LVEVAEEYRL VPDTLYLTVN 310 320 330 340 350 360 YIDRYLSGNE INRQRLQLLG VACMLIAAKY EEICAPQVEE FCYITDNTYF RDEVLEMEAS 370 380 390 400 410 420 VLNYLKFEVT APTAKCFLRR FVRVAQVSDE DPALHLEFLA NYVAELSLLE YNLLSYPPSL 430 440 450 460 470 480 VAASAIFLAK FILQPTKHPW NSTLAHYTQY KSSELSDCVK ALHRLFSVGP GSNLPAIREK 490 500 YTQHKYKFVA KKPCPPSIPT EFFRDATC

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Molecular characterization of mitotic cyclins in rice plants." Umeda M., Iwamoto N., Umeda-Hara C., Yamaguchi M., Hashimoto J., Uchimiya H. Mol. Gen. Genet. 262:230-238(1999) [PubMed: 10517318] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE. Strain: cv. Yamahoushi.
[2]	"The genome sequence and structure of rice chromosome 1." Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M. , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T. Nature 420:312-316(2002) [PubMed: 12447438] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[3]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[4]	"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana." The rice annotation project (RAP) Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare.
[5]	"The cell cycle genes cycA1;1 and cdc2Os-3 are coordinately regulated by gibberellin in planta." Fabian T., Lorbiecke R., Umeda M., Sauter M. Planta 211:376-383(2000) [PubMed: 10987556] [Abstract] Cited for: FUNCTION, TISSUE SPECIFICITY, DEVELOPMENTAL STAGE, INDUCTION.
[6]	"Genome-wide analysis of cyclin family in rice (Oryza sativa L.)." La H., Li J., Ji Z., Cheng Y., Li X., Jiang S., Venkatesh P.N., Ramachandran S. Mol. Genet. Genomics 275:374-386(2006) [PubMed: 16435118] [Abstract] Cited for: NOMENCLATURE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AB024986 mRNA. Translation: BAA86628.1. AP002481 Genomic DNA. Translation: BAA96590.1. AP008207 Genomic DNA. Translation: BAF04426.1.
RefSeq	NP_001042512.1.
UniGene	Os.4195
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	4324288.
KEGG	osa:4324288.
NMPDR	fig|39947.1.peg.5597.
Organism-specific databases
Gramene	Q7F830.
Family and domain databases
InterPro	IPR015453. CycA. IPR006670. Cyclin. IPR014400. Cyclin_A_B_D_E. IPR004367. Cyclin_C. IPR006671. Cyclin_N. IPR013763. Cyclin_related. [Graphical view]
Gene3D	G3DSA:1.10.472.10. Cyclin_related. 1 hit.
PANTHER	PTHR10177:SF23. CycA. 1 hit.
Pfam	PF02984. Cyclin_C. 1 hit. PF00134. Cyclin_N. 1 hit. [Graphical view]
PIRSF	PIRSF001771. Cyclin_A_B_D_E. 1 hit.
SMART	SM00385. CYCLIN. 2 hits. [Graphical view]
PROSITE	PS00292. CYCLINS. 1 hit. [Graphical view]
ProDom	Q7F830. [Graphical view] [Entries sharing at least one domain]
BLOCKS	Search...
Other Resources
ProtoNet	Search...

Entry information

Entry name

CCA11_ORYSJ

Accession

Primary (citable) accession number: Q7F830
Secondary accession number(s): Q9SSZ6

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 15, 2007
Last sequence update:	July 5, 2004
Last modified:	July 22, 2008
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

PPAP (Plant Proteome Annotation Project)