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UniProtKB/Swiss-Prot Q7Z5J8 (ANKAR_HUMAN)
Last modified
November 25, 2008.
Version 37.
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Ankyrin and armadillo repeat-containing protein | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 1434 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Subcellular location | Membrane; Single-pass membrane proteinPotential. |
| Tissue specificity | Ubiquitously expressed with highest level in pancreas and lowest in skeletal muscle. |
| Sequence similarities | Contains 5 ANK repeats. Contains 6 ARM repeats. |
Ontologies
Keywords | |
|---|---|
| Cellular component | Membrane |
| Coding sequence diversity | Alternative splicing Polymorphism |
| Domain | ANK repeat Repeat Transmembrane |
Gene Ontology (GO) | |
| Cellular component | integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 4 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: Q7Z5J8-1) Also known as: FLJ25415-2P; This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: Q7Z5J8-2) The sequence of this isoform differs from the canonical sequence as follows: 1066-1080: VAHTSNPVSQQFVVD → YLLKSRLCINTFCLQ 1081-1434: Missing. | ||||||
| Notes: No experimental confirmation available. | ||||||
| Isoform 3 (identifier: Q7Z5J8-3) The sequence of this isoform differs from the canonical sequence as follows: 1-236: Missing. 878-878: S → SGLFNLFLNSFE 1012-1026: GEAVIALSKDSRMHQ → YLLKSRLCINTFCLQ 1027-1434: Missing. | ||||||
| Notes: No experimental confirmation available. | ||||||
| Isoform 4 (identifier: Q7Z5J8-4) The sequence of this isoform differs from the canonical sequence as follows: 1-332: Missing. 706-716: VEMLQCESYKR → KCYSVKAINEG 717-1434: Missing. | ||||||
| Notes: No experimental confirmation available. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 1434 | 1434 | Ankyrin and armadillo repeat-containing protein | PRO_0000286806 | |||||
Regions | |||||||||
| Transmembrane | 309 – 329 | 21 | Potential | ||||||
| Repeat | 532 – 561 | 30 | ANK 1 | ||||||
| Repeat | 569 – 598 | 30 | ANK 2 | ||||||
| Repeat | 602 – 631 | 30 | ANK 3 | ||||||
| Repeat | 638 – 667 | 30 | ANK 4 | ||||||
| Repeat | 671 – 701 | 31 | ANK 5 | ||||||
| Repeat | 732 – 771 | 40 | ARM 1 | ||||||
| Repeat | 773 – 812 | 40 | ARM 2 | ||||||
| Repeat | 814 – 852 | 39 | ARM 3 | ||||||
| Repeat | 855 – 894 | 40 | ARM 4 | ||||||
| Repeat | 897 – 936 | 40 | ARM 5 | ||||||
| Repeat | 1072 – 1112 | 41 | ARM 6 | ||||||
Natural variations | |||||||||
| Alternative sequence | 1 – 332 | 332 | Missing in isoform 4. | VSP_025166 | |||||
| Alternative sequence | 1 – 236 | 236 | Missing in isoform 3. | VSP_025167 | |||||
| Alternative sequence | 706 – 716 | 11 | VEMLQCESYKR → KCYSVKAINEG in isoform 4. | VSP_025168 | |||||
| Alternative sequence | 717 – 1434 | 718 | Missing in isoform 4. | VSP_025169 | |||||
| Alternative sequence | 878 | 1 | S → SGLFNLFLNSFE in isoform 3. | VSP_025170 | |||||
| Alternative sequence | 1012 – 1026 | 15 | GEAVI…SRMHQ → YLLKSRLCINTFCLQ in isoform 3. | VSP_025171 | |||||
| Alternative sequence | 1027 – 1434 | 408 | Missing in isoform 3. | VSP_025172 | |||||
| Alternative sequence | 1066 – 1080 | 15 | VAHTS…QFVVD → YLLKSRLCINTFCLQ in isoform 2. | VSP_025173 | |||||
| Alternative sequence | 1081 – 1434 | 354 | Missing in isoform 2. | VSP_025174 | |||||
| Natural variant | 675 | 1 | I → V: dbSNP rs16831887. | VAR_032164 | |||||
| Natural variant | 1077 | 1 | F → L: dbSNP rs1225090. | VAR_032165 | |||||
Experimental info | |||||||||
| Sequence conflict | 8 | 1 | G → R in BAC86425. Ref.1 | ||||||
| Sequence conflict | 207 | 1 | K → R in BAC86425. Ref.1 | ||||||
| Sequence conflict | 436 | 1 | S → G in AAH47413. Ref.3 | ||||||
| Sequence conflict | 623 | 1 | C → Y in AAH47413. Ref.3 | ||||||
| Sequence conflict | 679 | 1 | S → L in AAH47413. Ref.3 | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2). Tissue: Testis. |
| [2] | "Generation and annotation of the DNA sequences of human chromosomes 2 and 4." Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H. Wilson R.K.Nature 434:724-731(2005) [PubMed: 15815621] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], VARIANT LEU-1077. |
| [3] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 3 AND 4). Tissue: Testis. |
| [4] | "Characterization of a novel human gene containing ANK repeats and ARM domains." Occhi G., Olivieri M., Rampazzo A., Danieli G.A. Biochem. Biophys. Res. Commun. 318:38-45(2004) [PubMed: 15110750] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 72-1434 (ISOFORM 1), ALTERNATIVE SPLICING, TISSUE SPECIFICITY. Tissue: Heart. |
Cross-references
Sequence databases | |
|---|---|
| AC013468 Genomic DNA. No translation available. AC012488 Genomic DNA. No translation available. AK126073 mRNA. Translation: BAC86425.1. BC044907 mRNA. Translation: AAH44907.1. BC047413 mRNA. Translation: AAH47413.1. AJ549812 mRNA. Translation: CAD71147.1. | |
| RefSeq | NP_653309.2. |
| UniGene | Hs.655700 |
3D structure databases | |
| ModBase | Search... |
PTM databases | |
| PhosphoSite | Q7Z5J8. |
Genome annotation databases | |
| Ensembl | ENSG00000151687. Homo sapiens. [Contig view] |
| GeneID | 150709. |
| KEGG | hsa:150709. |
Organism-specific databases | |
| HGNC | HGNC:26350. ANKAR. |
| MIM | 609803. gene. |
| GenAtlas | Search... |
| GeneCards | Search... |
Phylogenomic databases | |
| HOGENOM | Q7Z5J8. |
| HOVERGEN | Q7Z5J8. |
Gene expression databases | |
| ArrayExpress | Q7Z5J8. |
| CleanEx | HS_ANKAR. |
Family and domain databases | |
| InterPro | IPR002110. ANK. IPR011989. ARM-like. IPR000225. Armadillo. [Graphical view] |
| Gene3D | G3DSA:1.25.40.20. ANK. 1 hit. G3DSA:1.25.10.10. ARM-like. 2 hits. |
| Pfam | PF00023. Ank. 5 hits. PF00514. Arm. 5 hits. [Graphical view] |
| PRINTS | PR01415. ANKYRIN. |
| SMART | SM00248. ANK. 5 hits. SM00185. ARM. 7 hits. [Graphical view] |
| PROSITE | PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 2 hits. PS50176. ARM_REPEAT. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 86508. |
| SOURCE | Search... |

Clusters with