Reviewed, UniProtKB/Swiss-Prot Q83ES2 (RL23_COXBU)

Names and origin

Protein names

Recommended name:
    50S ribosomal protein L23

Gene names

Name:	rplW
Ordered Locus Names:	CBU_0240

Organism

Coxiella burnetii [Complete proteome] [HAMAP]

Taxonomic identifier

777 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella

Protein attributes

Sequence length	95 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome By similarity.
Subunit structure	Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome By similarity.
Sequence similarities	Belongs to the ribosomal protein L23P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view
Molecule processing
	Chain	1 – 95	95	50S ribosomal protein L23

Sequences

	Sequence		Length	Mass (Da)
	Q83ES2-1 [UniParc]. Last modified June 1, 2003. Version 1. Checksum: F809F56E16EA9088	FASTA	95	10,810
	10 20 30 40 50 60 MNEERLFEIL LAPHISEKGA LTTGQYVFEV MPDATKPEIK RAVEKQFNVT VKSVRTCNVK 70 80 90 GKTTRFRQVR GRRKNWKKAY VMLAPGSEID IAAGE

References

[1]

"Complete genome sequence of the Q-fever pathogen, Coxiella burnetii." Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C., Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M., Lee K.H., Carty H.A. , Scanlan D., Heinzen R.A., Thompson H.A., Samuel J.E., Fraser C.M., Heidelberg J.F. Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003) [PubMed: 12704232] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Nine Mile phase I / RSA 493.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE016828 Genomic DNA. Translation: AAO89798.1.
RefSeq	NP_819284.1.
3D structure databases
HSSP	HSSP built from PDB template 1N88 based on UniProtKB Q9RA57.
ModBase	Search...
Genome annotation databases
GeneID	1208121.
GenomeReviews	Gene locus CBU_0240 in contig AE016828_GR.
KEGG	cbu:CBU_0240.
NMPDR	fig|227377.1.peg.228.
TIGR	CBU_0240.
Phylogenomic databases
HOGENOM	Q83ES2.
Enzyme and pathway databases
BioCyc	CBUR227377:CBU_0240-MON.
Family and domain databases
HAMAP	MF_01369. [Tree]
InterPro	IPR012677. a_b_plait_nuc_bd. IPR001014. Ribosomal_L23_CS. IPR013025. Ribosomal_L25/23. [Graphical view]
Gene3D	G3DSA:3.30.70.330. a_b_plait_nuc_bd. 1 hit.
Pfam	PF00276. Ribosomal_L23. 1 hit. [Graphical view]
ProDom	PD001141. Ribosomal_L23. 1 hit. [Graphical view] [Entries sharing at least one domain]
PROSITE	PS00050. RIBOSOMAL_L23. False negative. [Graphical view]
BLOCKS	Search...
Other Resources
ProtoNet	Search...

Entry information

Entry name

RL23_COXBU

Accession

Primary (citable) accession number: Q83ES2

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 23, 2007
Last sequence update:	June 1, 2003
Last modified:	July 22, 2008
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)