Reviewed, UniProtKB/Swiss-Prot Q8KA35 (FLIR_BUCAP)

Names and origin

Protein names

Recommended name:
    Flagellar biosynthetic protein fliR

Gene names

Name:	fliR
Ordered Locus Names:	BUsg_077

Organism

Buchnera aphidicola subsp. Schizaphis graminum [Complete proteome] [HAMAP]

Taxonomic identifier

98794 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Buchnera

Protein attributes

Sequence length	258 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Role in flagellar biosynthesis By similarity.
Subcellular location	Cell membrane; Multi-pass membrane proteinPotential. Bacterial flagellum basal bodyBy similarity.
Sequence similarities	Belongs to the fliR/mopE/spaR family.

Ontologies

Keywords
Cellular component	Bacterial flagellum Cell membrane Membrane
Domain	Transmembrane
Technical term	Complete proteome
Gene Ontology (GO)
Cellular component	flagellin-based flagellum basal body Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view
Molecule processing
	Chain	1 – 258	258	Flagellar biosynthetic protein fliR
Regions
	Transmembrane	7 – 29	23	Potential
	Transmembrane	44 – 58	15	Potential
	Transmembrane	65 – 87	23	Potential
	Transmembrane	91 – 113	23	Potential
	Transmembrane	129 – 151	23	Potential
	Transmembrane	182 – 204	23	Potential
	Transmembrane	211 – 233	23	Potential

Sequences

	Sequence		Length	Mass (Da)
	Q8KA35-1 [UniParc]. Last modified October 1, 2002. Version 1. Checksum: 1ABEC1560FE85110	FASTA	258	29,666
	10 20 30 40 50 60 MLTFNSFNLA ILISNFFWPL VRILAFFSTA PIFNDQNVNK KVKIILSFLI AFLIKPFLPK 70 80 90 100 110 120 VNVELFSIIG LFLLFQQILI GIALGLTCQF LFAAFTLSGE IIALQIGLSF ANFFNSNRYI 130 140 150 160 170 180 GTSLISRWLN ILNLLFFLTL NVHLYLVFML IDSFYKIPVD VNFLSANIFF IFLKFSSNIF 190 200 210 220 230 240 LNGVMFALPI MIFFLISTLI MSILNRLSPQ ISIFSIGFPL NLLIGILILY YLMSMSFPFF 250 KSLVNQLISF IFYTFLKI

References

[1]

"50 million years of genomic stasis in endosymbiotic bacteria." Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S., Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E. Science 296:2376-2379(2002) [PubMed: 12089438] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE013218 Genomic DNA. Translation: AAM67647.1.
RefSeq	NP_660436.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1005893.
GenomeReviews	Gene locus BUsg_077 in contig AE013218_GR.
KEGG	bas:BUsg077.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	Q8KA35.
Enzyme and pathway databases
BioCyc	BAPH198804:BUSG077-MON.
Family and domain databases
InterPro	IPR006303. FliR. IPR002010. T3SS_IM_R. [Graphical view]
Pfam	PF01311. Bac_export_1. 1 hit. [Graphical view]
PRINTS	PR00953. TYPE3IMRPROT.
TIGRFAMs	TIGR01400. fliR. 1 hit.
ProDom	Q8KA35. [Graphical view] [Entries sharing at least one domain]
BLOCKS	Search...
Other Resources
ProtoNet	Search...

Entry information

Entry name

FLIR_BUCAP

Accession

Primary (citable) accession number: Q8KA35

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 8, 2002
Last sequence update:	October 1, 2002
Last modified:	September 2, 2008
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)