Reviewed,
UniProtKB/Swiss-Prot Q93070 (NAR4_HUMAN)
Last modified
July 22, 2008.
Version 77.
History...
Clusters with 100%,
90%,
50% identity |
Documents (8) |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin
| Protein names | Recommended name: Ecto-ADP-ribosyltransferase 4 EC=2.4.2.31 Alternative name(s): NAD(P)(+)--arginine ADP-ribosyltransferase 4 Mono(ADP-ribosyl)transferase 4 Dombrock blood group carrier molecule CD_antigen=CD297 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 314 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Catalytic activity | NAD(+) + protein-L-arginine = nicotinamide + N(omega)-(ADP-D-ribosyl)-protein-L-arginine. NADP(+) + protein-L-arginine = nicotinamide + N(omega)-((2'-phospho-ADP)-D-ribosyl)-protein-L-arginine. |
| Subcellular location | |
| Tissue specificity | Expressed in spleen and T-cells. |
| Polymorphism | DO is responsible for the Dombrock blood group system. The molecular basis of the Do(a)/Do(b) blood group antigen is a single variation in position 265; Asn-265 corresponds to Do(a) and Asp-265 to Do(b). It is also responsible for the antigens Gregory [Gy(a)], Holley [Hy] and Joseph [Jo(a)]. |
| Sequence similarities | Belongs to the Arg-specific ADP-ribosyltransferase family. |
Ontologies
Keywords | |
|---|---|
| Cellular component | Cell membrane Membrane |
| Coding sequence diversity | Polymorphism |
| Domain | Signal |
| Ligand | NAD NADP |
| Molecular function | Blood group antigen Glycosyltransferase Transferase |
| PTM | GPI-anchor Glycoprotein Lipoprotein |
Gene Ontology (GO) | |
| Biological process | arginine metabolic process Ref.1 Non-traceable author statement. Source: UniProtKB protein amino acid ADP-ribosylation Ref.5Non-traceable author statement. Source: UniProtKB |
| Cellular component | membrane Ref.5 Non-traceable author statement. Source: UniProtKB |
| Molecular function | NAD(P)+-protein-arginine ADP-ribosyltransferase activity Ref.5 Non-traceable author statement. Source: UniProtKB |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | ||||
Molecule processing | ||||||||
|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 46 | 46 | Potential | |||||
| Chain | 47 – 285 | 239 | Ecto-ADP-ribosyltransferase 4 | |||||
| Propeptide | 286 – 314 | 29 | Removed in mature form Potential | |||||
Sites | ||||||||
| Active site | 251 | 1 | By similarity | |||||
Amino acid modifications | ||||||||
| Lipidation | 285 | 1 | GPI-anchor amidated alanine Potential | |||||
| Glycosylation | 114 | 1 | N-linked (GlcNAc...) Potential | |||||
| Glycosylation | 178 | 1 | N-linked (GlcNAc...) Potential | |||||
| Glycosylation | 222 | 1 | N-linked (GlcNAc...) Potential | |||||
| Glycosylation | 257 | 1 | N-linked (GlcNAc...) Potential | |||||
| Glycosylation | 274 | 1 | N-linked (GlcNAc...) Potential | |||||
Natural variations | ||||||||
| Natural variant | 108 | 1 | G → V in Hy1 and Hy2. | |||||
| Natural variant | 117 | 1 | T → I in Jo(a). | |||||
| Natural variant | 135 | 1 | D → E | |||||
| Natural variant | 189 | 1 | T → M | |||||
| Natural variant | 265 | 1 | N → D in Do(b), Hy1 and Hy2. dbSNP rs11276. | |||||
| Natural variant | 300 | 1 | L → V in Hy1. | |||||
Experimental info | ||||||||
| Sequence conflict | 48 | 1 | E → Q in CAA65095. Ref.5 | |||||
| Sequence conflict | 116 | 1 | T → S in CAA65095. Ref.5 | |||||
Sequences
| ||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Identification of the Dombrock blood group glycoprotein as a polymorphic member of the ADP-ribosyltransferase gene family." Gubin A.N., Njoroge J.M., Wojda U., Pack S.D., Rios M., Reid M.E., Miller J.L. Blood 96:2621-2627(2000) [PubMed: 11001920] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], VARIANT DO(B). |
| [2] | "Insights into the Holley- and Joseph- phenotypes." Rios M., Hue-Roye K., Oyen R., Miller J., Reid M.E. Transfusion 42:52-58(2002) [PubMed: 11896313] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS DO(B); JO(A); HY1 AND HY2. |
| [3] | SeattleSNPs program for genomic applications Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], VARIANTS VAL-108; ILE-117; GLU-135; MET-189; ASP-265 AND VAL-300. |
| [4] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain. |
| [5] | "Two novel human members of an emerging mammalian gene family related to mono-ADP-ribosylating bacterial toxins." Koch-Nolte F., Haag F., Braren R., Kuehl M., Hoovers J., Balasubramanian S., Bazan J.F., Thiele H.-G. Genomics 39:370-376(1997) [PubMed: 9119374] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 48-314. |
| [6] | "Polymerase chain reaction with sequence-specific primers-based genotyping of the human Dombrock blood group DO1 and DO2 alleles and the DO gene frequencies in Chinese blood donors." Wu G.-G., Jin S.-Z., Deng Z.-H., Zhao T.-M. Vox Sang. 81:49-51(2001) [PubMed: 11520417] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 49-284, VARIANT DO(B). |
Cross-references
Sequence databases | |
|---|---|
| AF290204 mRNA. Translation: AAG17845.1. AF382213, AF382211, AF382212 Genomic DNA. Translation: AAM21462.1. AF382216, AF382214, AF382215 Genomic DNA. Translation: AAM21464.1. AF382219, AF382217, AF382218 Genomic DNA. Translation: AAM21465.1. AF382222, AF382220, AF382221 Genomic DNA. Translation: AAM21466.1. AF382225, AF382223, AF382224 Genomic DNA. Translation: AAM21467.1. AY899803 Genomic DNA. Translation: AAW65375.1. BC074727 mRNA. Translation: AAH74727.1. X95826 Genomic DNA. Translation: CAA65095.1. AF340233 Genomic DNA. Translation: AAK11274.1. AF340234 Genomic DNA. Translation: AAK11275.1. | |
| RefSeq | NP_066549.2. |
| UniGene | Hs.591158 Hs.655792 Hs.668803 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1GXY based on UniProtKB P20974. |
| ModBase | Search... |
Genome annotation databases | |
| Ensembl | ENSG00000111339. Homo sapiens. [Contig view] |
| GeneID | 420. |
| KEGG | hsa:420. |
Organism-specific databases | |
| H-InvDB | HIX0036719. |
| HGNC | HGNC:726. ART4. |
| MIM | 110600. gene+phenotype. |
| PharmGKB | PA142672580. |
| GenAtlas | Search... |
| GeneCards | Search... |
| GeneLynx | Search... |
Phylogenomic databases | |
| HOGENOM | Q93070. |
| HOVERGEN | Q93070. |
Gene expression databases | |
| ArrayExpress | Q93070. |
| CleanEx | HS_ART4. HS_DOK1. |
| GermOnline | ENSG00000111339. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR000768. ART. [Graphical view] |
| PANTHER | PTHR10339. ART. 1 hit. |
| Pfam | PF01129. ART. 1 hit. [Graphical view] |
| PRINTS | PR00970. RIBTRNSFRASE. |
| PROSITE | PS01291. ART. 1 hit. [Graphical view] |
| ProDom | Q93070. [Graphical view] [Entries sharing at least one domain] |
| BLOCKS | Search... |
Other Resources | |
| SOURCE | Search... |
| ProtoNet | Search... |
Entry information
| Entry name | NAR4_HUMAN | ||||||||
| Accession | Primary (citable) accession number: Q93070 Secondary accession number(s): Q9BZ50, Q9BZ51, Q9HB06 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| Blood group antigen proteins Nomenclature of blood group antigens and list of entries |
| Human cell differentiation molecules CD nomenclature of surface proteins of human leucocytes and list of entries |
| Human chromosome 12 Human chromosome 12: entries, gene names and cross-references to MIM |
| Human entries with polymorphisms or disease mutations List of human entries with polymorphisms or disease mutations |
| Human polymorphisms and disease mutations Index of human polymorphisms and disease mutations |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| UniProtKB secondary accession numbers Index of UniProtKB secondary accession numbers |
| SIMILARITY comments Index of protein domains and families |

Clusters with


