Reviewed, UniProtKB/Swiss-Prot Q9D1A0 (CI021_MOUSE)

Names and origin

Protein names	Recommended name:     UPF0308 protein C9orf21 homolog
Organism	Mus musculus (Mouse)
Taxonomic identifier	10090 [NCBI]
Taxonomic lineage	Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus

Protein attributes

Sequence length	226 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the UPF0308 family.

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view
Molecule processing
	Chain	1 – 226	226	UPF0308 protein C9orf21 homolog

Sequences

	Sequence		Length	Mass (Da)
	Q9D1A0-1 [UniParc]. Last modified June 1, 2001. Version 1. Checksum: 9E256CFDEB76FB99	FASTA	226	24,904
	10 20 30 40 50 60 MAAPVTRQVS GCAGRVPSPA GSVTERGQPL AAAVAELPVL DASGRRVTFG ALFRERRAVV 70 80 90 100 110 120 VFVRHFLCYV CKEYVEDLAK IPKSVLREAD VTLIVIGQSS YHHIEPFCKL TGYSHEIYVD 130 140 150 160 170 180 PEREIYKRLG MKRGEEISSS GQSPHIKSNL LSGSLQSLWR AVTGPLFDFQ GDPAQQGGTL 190 200 210 220 ILGPGNNIHF VHRDRNRLDH KPINSVLQLV GVQPVNFMSR PTVIHV

References

[1]

"The transcriptional landscape of the mammalian genome." Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y. Science 309:1559-1563(2005) [PubMed: 16141072] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: C57BL/6J. Tissue: Embryo.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AK003782 mRNA. Translation: BAB22993.1. AK006589 mRNA. Translation: BAB24662.1. AK148379 mRNA. Translation: BAE28518.1.
RefSeq	NP_079646.1. XP_001472683.1.
UniGene	Mm.227240
3D structure databases
ModBase	Search...
Genome annotation databases
Ensembl	ENSMUSG00000021482. Mus musculus. [Contig view]
GeneID	100044674. 66129.
KEGG	mmu:100044674. mmu:66129.
Organism-specific databases
MGI	MGI:1913379. 1110018J18Rik.
Phylogenomic databases
HOGENOM	Q9D1A0.
HOVERGEN	Q9D1A0.
Gene expression databases
ArrayExpress	Q9D1A0.
CleanEx	MM_1110018J18RIK.
GermOnline	ENSMUSG00000021482. Mus musculus.
Family and domain databases
ProDom	Q9D1A0. [Graphical view] [Entries sharing at least one domain]
BLOCKS	Search...
Other Resources
LinkHub	Q9D1A0.
ProtoNet	Search...

Entry information

Entry name

CI021_MOUSE

Accession

Primary (citable) accession number: Q9D1A0
Secondary accession number(s): Q3UFP2, Q9CVT8

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 13, 2004
Last sequence update:	June 1, 2001
Last modified:	July 22, 2008
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HPI (Human Proteome Initiative)