Family 10 xylanase XynB - Thermotoga sp. strain FjSS3-B.1

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Unreviewed, UniProtKB/TrEMBL Q9R6T4 (Q9R6T4_9THEM)

Last modified November 25, 2008. Version 47. History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein names	Submitted name: Family 10 xylanase XynB EMBL AAD32593.2
Organism	Thermotoga sp. strain FjSS3-B.1 EMBL AAD32593.2
Taxonomic identifier	33791 [NCBI]
Taxonomic lineage	Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermotoga

Protein attributes

Sequence length	1055 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432V0

Ontologies

Keywords
Biological process	Xylan degradation
Molecular function	Glycosidase RuleBase RU003432V0 Hydrolase
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

Q9R6T4-1 [UniParc].

Last modified May 1, 2000. Version 1.
Checksum: BE97A3F9D9A3A42E
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1,055

119,234

        10         20         30         40         50         60 
MRKKRRGFLN ASTAVLVGIL AGFLGVVLAA TGALGFGGKG VSPFETVLVL SFEGTTDGAS 

        70         80         90        100        110        120 
PFGKDVVVTA SQDVAADGEY SLKVENRTSV WDGVEIDLTG KVNTGTDYLL SFHVYQTSDS 

       130        140        150        160        170        180 
PQLFSVLART EDEKGERYKI LADKVVVPNY WKEILVPFSP TFEGTPAKFS LIITSPKKTD 

       190        200        210        220        230        240 
FVFYVDNVQV LTPKEAGPKV VYETSFEKGI GDWQPRGSDV KISISPKVAH SGKKSLFVSN 

       250        260        270        280        290        300 
RQKGWHGAQI SLKGILKTGK TYAFEAWVYQ ESGQDQTIIM TMQRKYSSDS STKYEWIKAA 

       310        320        330        340        350        360 
TVPSGQWVQL SGTYTIPAGV TVEDLTLYFE SQNPTLEFYV DDVKVVDTTS AEIKLEMSPE 

       370        380        390        400        410        420 
EEIPALKDVL KDYFRVGVAL PSKVFINQKD IALISKHFNS ITAENEMKPD SLLAGIENGK 

       430        440        450        460        470        480 
LKFRFETADK YIEFAQQNGM VVRGHTLVWH NQTPEWFFKD ENGNLLSKEE MTERLREYIH 

       490        500        510        520        530        540 
TVVGHFKGKV YAWDVVNEAV DPNQPDGLRR STWYQIMGPD YIELAFKFAR EADPDAKLFY 

       550        560        570        580        590        600 
NDYNTFEPRK RDIIYNLVKD LKEKGLIDGI GMQCHISLAT DIKQIEEAIK KFSTIPGIEI 

       610        620        630        640        650        660 
HITELDMSVY RDSSSNYPEA PRTALIEQAH KMMQLFEIFK KYSNVITNVT FWGLKDDYSW 

       670        680        690        700        710        720 
RATRRNDWPL IFDKDHQAKL AYWAIVAPEV LPPLPKESRI SEGEAVVVGM MDDSYLMSKP 

       730        740        750        760        770        780 
IEILDEEGNV KATIRAVWKD STIYIYGEVQ DKTKKPAEDG VAIFINPNNE RTPYLQPDDT 

       790        800        810        820        830        840 
YAVLWTNWKT EVDREDVQVK KFVGPGFRRY SFEMSITIPG VEFKKDSYIG FDAAVIDDGK 

       850        860        870        880        890        900 
WYSWSDTTNS QKTNTMNYGT LKLEGIMVAT AKYGTPVIDG EIDEIWNTTE EIETKAVAMG 

       910        920        930        940        950        960 
SLDKNATAKV RVLWDENYLY VLAIVKDPVL NKDNSNPWEQ DSVEIFIDEN NHKTGYYEDD 

       970        980        990       1000       1010       1020 
DAQFRVNYMN EQTFGTGGSP ARFKTAVKLI EGGYIVEAAI KWKTIKPTPN TVIGFNIQVN 

      1030       1040       1050 
DANEKGQRVG IISWSDPTNN SWRDPSKFGN LRLIK

References

[1]	"Sequencing and expression of additional xylanase genes from the hyperthermophile Thermotoga maritima FjSS3B.1." Reeves R.A., Gibbs M.D., Morris D.D., Griffiths K.R., Saul D.J., Bergquist P.L. Appl. Environ. Microbiol. 66:1532-1537(2000) [PubMed: 10742238] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: FjSS3-B.1 EMBL AAD32593.2.
+	Additional computationally mapped references.

Cross-references

Sequence databases
	AF126689 Genomic DNA. Translation: AAD32593.2.
3D structure databases
HSSP	HSSP built from PDB template 1I8A based on UniProtKB Q60037.
SMR	Q9R6T4. Positions 867-1055.
ModBase	Search...
Family and domain databases
InterPro	IPR010502. Carb-bd_9. IPR015922. Carb-bd_9-like. IPR003305. CenC_carb_bd. IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_sub_cat. IPR017909. Twin_arg_translocation_Tat. [Graphical view]
Gene3D	G3DSA:2.60.40.1190. CBD9. 2 hits. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF02018. CBM_4_9. 2 hits. PF06452. DUF1083. 1 hit. PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
PROSITE	PS00591. GLYCOSYL_HYDROL_F10. 1 hit. PS51318. TAT. 1 hit. [Graphical view]

Entry information

Entry name

Q9R6T4_9THEM

Accession

Primary (citable) accession number: Q9R6T4

Entry history

Integrated into UniProtKB/TrEMBL:	May 1, 2000
Last sequence update:	May 1, 2000
Last modified:	November 25, 2008
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information