Reviewed,
UniProtKB/Swiss-Prot Q9S744 (CML9_ARATH)
Last modified
November 25, 2008.
Version 49.
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Calmodulin-like protein 9 Short name=AtCaM-9 | ||||||||
| Gene names |
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| Organism | Arabidopsis thaliana (Mouse-ear cress) [Complete proteome] | ||||||||
| Taxonomic identifier | 3702 [NCBI] | ||||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis |
Protein attributes
| Sequence length | 151 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Potential calcium sensor. |
| Tissue specificity | Expressed in leaves, flowers and siliques. |
| Induction | By touch and during darkness conditions. |
| Sequence similarities | Belongs to the calmodulin family. Contains 4 EF-hand domains. |
Ontologies
Keywords | |
|---|---|
| Domain | Repeat |
| Ligand | Calcium |
| PTM | Methylation |
| Technical term | Complete proteome |
Gene Ontology (GO) | |
| Molecular function | calcium ion binding Inferred from electronic annotation. Source: InterPro protein bindingInferred from physical interaction. Source: IntAct |
| Complete GO annotation... | |
Binary interactions
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 151 | 151 | Calmodulin-like protein 9 | PRO_0000073653 | |||||
Regions | |||||||||
| Domain | 8 – 43 | 36 | EF-hand 1 | ||||||
| Domain | 44 – 79 | 36 | EF-hand 2 | ||||||
| Domain | 81 – 116 | 36 | EF-hand 3 | ||||||
| Domain | 117 – 151 | 35 | EF-hand 4 | ||||||
| Calcium binding | 94 – 105 | 12 | 1 Potential | ||||||
| Calcium binding | 130 – 141 | 12 | 2 Potential | ||||||
Amino acid modifications | |||||||||
| Modified residue | 116 | 1 | N6,N6,N6-trimethyllysine By similarity | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Characterization of three new members of the Arabidopsis thaliana calmodulin gene family: conserved and highly diverged members of the gene family functionally complement a yeast calmodulin null." Zielinski R.E. Planta 214:446-455(2002) [PubMed: 11855649] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, TISSUE SPECIFICITY. Strain: cv. Columbia. |
| [2] | "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana." Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.  Tabata S.Nature 408:820-822(2000) [PubMed: 11130713] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia. |
| [3] | "Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. Ecker J.R.Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia. |
| [4] | "Calmodulins and related potential calcium sensors of Arabidopsis." McCormack E., Braam J. New Phytol. 159:585-598(2003) Cited for: GENE FAMILY, NOMENCLATURE. |
| [5] | "Genome-wide identification of touch- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes." Lee D., Polisensky D.H., Braam J. New Phytol. 165:429-444(2005) [PubMed: 15720654] [Abstract] Cited for: INDUCTION. |
Cross-references
Sequence databases | |
|---|---|
| AF178075 mRNA. Translation: AAD53315.1. AL049711 Genomic DNA. Translation: CAB41312.1. AF380635 mRNA. Translation: AAK55716.1. AY054133 mRNA. Translation: AAL06794.1. | |
| PIR | T49071. |
| RefSeq | NP_190760.1. |
| UniGene | At.24807 |
3D structure databases | |
| HSSP | HSSP built from PDB template 1AK8 based on UniProtKB P62157. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9S744. |
Genome annotation databases | |
| GeneID | 824355. |
| GenomeReviews | Gene locus AT3G51920 in contig BA000014_GR. |
| KEGG | ath:AT3G51920. |
| NMPDR | fig|3702.1.peg.16450. |
Organism-specific databases | |
| GeneFarm | 5186. |
| TAIR | At3g51920. |
Gene expression databases | |
| GermOnline | AT3G51920. Arabidopsis thaliana. |
Family and domain databases | |
| InterPro | IPR011992. EF-Hand_type. IPR002048. EF_hand_Ca_bd. [Graphical view] |
| Gene3D | G3DSA:1.10.238.10. EF-Hand_type. 1 hit. |
| Pfam | PF00036. efhand. 4 hits. [Graphical view] |
| ProDom | PD000012. EF-hand. 2 hits. [Graphical view] [Entries sharing at least one domain] |
| SMART | SM00054. EFh. 4 hits. [Graphical view] |
| PROSITE | PS00018. EF_HAND_1. 2 hits. PS50222. EF_HAND_2. 4 hits. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | CML9_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q9S744 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Arabidopsis thaliana Arabidopsis thaliana: entries and gene names |
| SIMILARITY comments Index of protein domains and families |
