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Reviewed, UniProtKB/Swiss-Prot Q9SE50 (BGL1_ARATH)

Last modified July 22, 2008. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Beta-glucosidase homolog
    EC=3.2.1.-
Gene names
Name: BG1
Ordered Locus Names: At1g52400
ORF Names: F19K6.15
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

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Protein attributes

Sequence length528 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level.

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General annotation (Comments)

Subcellular location

Endoplasmic reticulum.

Induction

Transcription suppressed by NaCl.

Sequence similarities

Belongs to the glycosyl hydrolase 1 family.

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Ontologies

Keywords

   Cellular componentEndoplasmic reticulum
   Coding sequence diversityAlternative splicing
   DomainSignal
   Molecular functionGlycosidase
Hydrolase
   PTMGlycoprotein
   Technical termComplete proteome

Gene Ontology (GO)

None. [Check GOA]

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Alternative products

This entry describes 1 isoform produced by alternative splicing. [Select]

Notes: A number of isoforms are produced. According to EST sequences.
Isoform 1 (identifier: Q9SE50-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical view

Molecule processing

Signal peptide1 – 2121 Potential
Chain22 – 528507Beta-glucosidase homolog

Regions

Motif525 – 5284Prevents secretion from ER Potential

Sites

Active site2071Proton donor Potential
Active site4221Nucleophile By similarity

Amino acid modifications

Glycosylation1891N-linked (GlcNAc...) Potential
Glycosylation4661N-linked (GlcNAc...) Potential
Glycosylation4991N-linked (GlcNAc...) Potential

Experimental info

Sequence conflict1341S → N in AAF22295. Ref.1

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Sequences

Sequence LengthMass (Da)Tools
Isoform 1 [UniParc].

Last modified February 5, 2008. Version 2.
Checksum: F148D04C0A6F27B8

FASTA52860,459
        10         20         30         40         50         60 
MVRFEKVHLV LGLALVLTLV GAPTKAQGPV CGAGLPDKFS RLNFPEGFIW GTATAAFQVE 

        70         80         90        100        110        120 
GAVNEGCRGP SMWDTFTKKF PHRCENHNAD VAVDFYHRYK EDIQLMKDLN TDAFRLSIAW 

       130        140        150        160        170        180 
PRIFPHGRMS KGISKVGVQF YHDLIDELLK NNIIPLVTVF HWDTPQDLED EYGGFLSGRI 

       190        200        210        220        230        240 
VQDFTEYANF TFHEYGHKVK HWITFNEPWV FSRAGYDNGK KAPGRCSPYI PGYGQHCQDG 

       250        260        270        280        290        300 
RSGYEAYQVS HNLLLSHAYA VDAFRNCKQC AGGKIGIAHS PAWFEPQDLE HVGGSIERVL 

       310        320        330        340        350        360 
DFILGWHLAP TTYGDYPQSM KDRVGHRLPK FTEAEKKLLK GSTDYVGMNY YTSVFAKEIS 

       370        380        390        400        410        420 
PDPKSPSWTT DSLVDWDSKS VDGYKIGSKP FNGKLDVYSK GLRYLLKYIK DNYGDPEVII 

       430        440        450        460        470        480 
AENGYGEDLG EKHNDVNFGT QDHNRKYYIQ RHLLSMHDAI CKDKVNVTGY FVWSLMDNFE 

       490        500        510        520 
WQDGYKARFG LYYIDFQNNL TRHQKVSGKW YSEFLKPQFP TSKLREEL

« Hide

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References

« Hide 'large scale' references
[1]"A transgenic Arabidopsis plant overexpressing an ER localized b-glucosidase homolog that is transcriptionally suppressed by NaCl is hypersensitive to NaCl stress."
Piao H.L., Hwang I.
Submitted (SEP-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed: 11130712] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed: 14593172] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.

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Cross-references

Sequence databases

AF183827 mRNA. Translation: AAF22295.1.
AC037424 Genomic DNA. Translation: AAG51546.1.
AY039855 mRNA. Translation: AAK63959.1.
AY056415 mRNA. Translation: AAL08271.1.
BT000515 mRNA. Translation: AAN18084.1.
PIRC96564.
RefSeqNP_175649.1.
UniGeneAt.24169

3D structure databases

HSSPHSSP built from PDB template 1CBG based on UniProtKB P26205.
ModBaseSearch...

2-D gel databases

SWISS-2DPAGEQ9SE50.

Proteomic databases

ProMEXQ9SE50.

Genome annotation databases

GeneID841670.
GenomeReviewsGene locus AT1G52400 in contig CT485782_GR.

Organism-specific databases

TAIRAt1g52400.

Family and domain databases

InterProIPR000886. ER_targeting_sequence.
IPR001360. Glyco_hydro_1.
IPR013781. Glyco_hydro_sub_cat.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHERPTHR10353. Glyco_hydro_1. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
ProDomPD000650. Glyco_hydro_euk. 1 hit.
[Graphical view] [Entries sharing at least one domain]
PROSITEPS00014. ER_TARGET. 1 hit.
PS00572. GLYCOSYL_HYDROL_F1_1. False negative.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
BLOCKSSearch...

Other Resources

ProtoNetSearch...

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Entry information

Entry nameBGL1_ARATH
AccessionPrimary (citable) accession number: Q9SE50
Secondary accession number(s): Q93V63
Entry history
Integrated into UniProtKB/Swiss-Prot: January 11, 2001
Last sequence update: February 5, 2008
Last modified: July 22, 2008
This is version 56 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

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Relevant documents

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

UniProtKB secondary accession numbers

Index of UniProtKB secondary accession numbers

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Alternative products · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents