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Reviewed, UniProtKB/Swiss-Prot Q9XHY7 (HACL3_ORYSJ)

Last modified July 22, 2008. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Probable histone acetyltransferase HAC-like 3
    EC=2.3.1.48
Gene names
Ordered Locus Names: Os01g0246100, Loc_Os01g14370
ORF Names: OSJNBa0049B20.5, OSJNBa0004G10.16
OrganismOryza sativa subsp. japonica (Rice)
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza

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Protein attributes

Sequence length1276 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

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General annotation (Comments)

Function

Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation By similarity.

Catalytic activity

Acetyl-CoA + histone = CoA + acetylhistone.

Subcellular location

NucleusProbable.

Sequence similarities

Contains 1 PHD-type zinc finger.

Contains 1 TAZ-type zinc finger.

Contains 2 ZZ-type zinc fingers.

Caution

It is uncertain whether Met-1 or Met-2 is the initiator.

Sequence caution

The sequence AAD38279.1 differs from that shown. Reason: Erroneous gene model prediction.

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Ontologies

Keywords

   Biological processTranscription
Transcription regulation
   Cellular componentNucleus
   DomainCoiled coil
Repeat
Zinc-finger
   LigandMetal-binding
Zinc
   Molecular functionActivator
Acyltransferase
Chromatin regulator
Transferase

Gene Ontology (GO)

None. [Check GOA]

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical view

Molecule processing

Chain1 – 12761276Probable histone acetyltransferase HAC-like 3

Regions

Zinc finger621 – 68969PHD-type
Zinc finger1012 – 105948ZZ-type 1
Zinc finger1124 – 117148ZZ-type 2
Zinc finger1177 – 126084TAZ-type
Coiled coil953 – 97321 Potential
Compositional bias234 – 24714Ser-rich
Compositional bias1130 – 115728Cys-rich

Experimental info

Sequence conflict4681P → Q Ref.2

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Sequences

Sequence LengthMass (Da)Tools
Q9XHY7-1 [UniParc].

Last modified January 9, 2007. Version 2.
Checksum: 902E2A329079778E

FASTA1,276145,098
        10         20         30         40         50         60 
MMAKTLQGTQ QQYAASGFPT QQYPTSGWTQ SAAEILQLDN MDQDTSVVRN IIHRKIVEYL 

        70         80         90        100        110        120 
NERKEFCNFD LSFLMEIGKC IDRHLFEKAD SKIKYMDLET LRTRLNAIVN SASFRGSMFH 

       130        140        150        160        170        180 
WSASAASSKL NSQQLPVMEV PIYHDRVTPG PNNLPSCAYN VSSTQGYNQY ENCMGAANFA 

       190        200        210        220        230        240 
HSLADKPKQM PERLANTIFT SCASTLPKCS PSIDVLHIGH IKEHFSGDAY QNDSSQPSTS 

       250        260        270        280        290        300 
GSSSSLSAVW DQTTCSSAMR TLPMDSFSTV NGQNLSTNNK SLYPTTGQGP LLQQYIECEM 

       310        320        330        340        350        360 
KQETWSRSLE QSDQSNITTG NRDLYHAQIH PYINGEHKRD RCIQMKEKLG HTSDHEGFSR 

       370        380        390        400        410        420 
EKSSNLSNHF MHHQQGFMTN YGACSPVSKT VDRAEQTSNS TVSKPTSPAS DGSSGKHYPA 

       430        440        450        460        470        480 
KRLKVDVPHL VHVNEMEASK EQQPAANETY ASAETVQSEV TNSPTKSPCC TSLGDNIACT 

       490        500        510        520        530        540 
DNVHGMDMVR LSGSAVQTEE EFRRENSDIE MKDAKVDLLD QTLSGDSLRA RKRRGASVLY 

       550        560        570        580        590        600 
ALTSEELKDH LCTLNHDTSQ SKVPTEELLS VEGLPDQNTC NLCGMERLLF EPPPRFCALC 

       610        620        630        640        650        660 
FKIINSTGSY YVEVENGNDK SSICGRCHHL SSAKAKYQKR FSYAETDAEA EWWVQCDKCK 

       670        680        690        700        710        720 
AWQHQICALF NPKIVDPEAE YTCAKCFLKE KDNEDVDSLE PSTILGAREL PRTRLSDHIE 

       730        740        750        760        770        780 
QRLSERLVQE RQQRAIASGK SVDEVPGVEG LTVRVVSSAD RTLQVQPRFK DFFKKEQYPG 

       790        800        810        820        830        840 
EFPYKSKAIL LFQKNEGVDV CLFAMYVQEY GSACPSPNQR HVYLAYIDSV KYFRPEIKSA 

       850        860        870        880        890        900 
SGEALRTFVY HEILIGYLDF CKKRGFVSCS IWTCPSTKRD DYVLYCHPTI QKMPKSDKLR 

       910        920        930        940        950        960 
SWYQNLVKKA VKEGVVVERN TLYDFFLQPT NECKTNISAA WLPYCDNDFW PGEAERLLEK 

       970        980        990       1000       1010       1020 
KDDDTSQKKE TQLGRLLRVA KRDDRKGNLE DILLVHKLGE RLRTMKEDFL MLCLQQFCKH 

      1030       1040       1050       1060       1070       1080 
CHHPIVSGSS WVCTSCKNFF LCERCYAEEL NTPLKDRHPA TTKQKHAFER IEEEPLPETD 

      1090       1100       1110       1120       1130       1140 
DVDPTMESKY FDSRIDFLKH CQDNQYQFDT LRRAKHSTMM ILYHLHDSTC SSCHRAMDQC 

      1150       1160       1170       1180       1190       1200 
LAWRCLVCLG CNFCDSCYKQ DGESLHIHKL RQKKDHHVLQ KYTLQDYLEG LVHASRCFDR 

      1210       1220       1230       1240       1250       1260 
SCTSKLCLTL KKLFFHGVRC HTRARGGGGC HMCVFMWKLL FTHSLLCDNA DCSAPRCRDI 

      1270 
KAYIADRSMT DLSISG

« Hide

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References

« Hide 'large scale' references
[1]"The genome sequence and structure of rice chromosome 1."
Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M. expand/collapse author list , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
Nature 420:312-316(2002) [PubMed: 12447438] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[2]"The map-based sequence of the rice genome."
International rice genome sequencing project (IRGSP)
Nature 436:793-800(2005) [PubMed: 16100779] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Nipponbare.
[3]"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana."
The rice annotation project (RAP)
Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract]
Cited for: GENOME REANNOTATION.
Strain: cv. Nipponbare.
[4]"Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
The rice full-length cDNA consortium
Science 301:376-379(2003) [PubMed: 12869764] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Nipponbare.

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Cross-references

Sequence databases

AC007789 Genomic DNA. Translation: AAD38279.1. Sequence problems.
AP003074 Genomic DNA. Translation: BAE95818.1. Different initiation.
AP008207 Genomic DNA. Translation: BAF04486.1.
AK120732 mRNA. No translation available.
RefSeqNP_001042572.1.
UniGeneOs.15122

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID4326755.
KEGGosa:4326755.

Organism-specific databases

GrameneQ9XHY7.

Family and domain databases

InterProIPR010303. DUF902_CREBbp.
IPR009255. Trans_coact.
IPR001965. Znf_PHD.
IPR013083. Znf_RING/FYVE/PHD.
IPR000197. Znf_TAZ.
IPR000433. Znf_ZZ.
[Graphical view]
Gene3DG3DSA:3.30.40.10. Znf_RING/FYVE/PHD. 1 hit.
G3DSA:1.20.1020.10. Znf_TAZ. 1 hit.
PfamPF06001. DUF902. 1 hit.
PF06010. DUF906. 1 hit.
PF02135. zf-TAZ. 1 hit.
[Graphical view]
SMARTSM00249. PHD. 1 hit.
SM00291. ZnF_ZZ. 1 hit.
[Graphical view]
PROSITEPS01359. ZF_PHD_1. 1 hit.
PS50016. ZF_PHD_2. False negative.
PS50134. ZF_TAZ. 1 hit.
PS01357. ZF_ZZ_1. 1 hit.
PS50135. ZF_ZZ_2. 1 hit.
[Graphical view]
ProDomQ9XHY7.
[Graphical view] [Entries sharing at least one domain]
BLOCKSSearch...

Other Resources

ProtoNetSearch...

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Entry information

Entry nameHACL3_ORYSJ
AccessionPrimary (citable) accession number: Q9XHY7
Secondary accession number(s): Q0JP42, Q1EHS1
Entry history
Integrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: January 9, 2007
Last modified: July 22, 2008
This is version 41 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

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Relevant documents

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

UniProtKB secondary accession numbers

Index of UniProtKB secondary accession numbers

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents